Gene Pmen_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4256 
SymbolhisB 
ID5107030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4659163 
End bp4659756 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID640505520 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001189735 
Protein GI146309270 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000104462 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGAAC GTACGGCATT CGTCGAGCGC AACACCCTGG AGACCCAGGT CAAGGTCTCG 
ATCAACCTGG ATGGCACCGG CAAGGCCAAA CTCGACATTG GCGTGCCGTT TCTCGAGCAC
ATGCTCGACC AGATCGCCCG TCATGGCCTG ATCGACCTCG ATATCGAGTG CAAGGGCGAT
CTGCATATCG ACGACCACCA CACCGTCGAG GACGTCGGCA TCACCCTCGG CCAGGCCTTC
GCCAAGGCCG TCGGCGACAA GAAGGGCATG ACCCGCTACG GCCACTCCTA CGTGCCGCTG
GACGAAGCGC TGTCGCGCGT GGTGATCGAC TTCTCCGGTC GCCCCGGTCT GCAGATGCAT
GTGCCGTTCA CCCGCGCCGT GGTCGGCAAC TTCGACGTTG ACCTGTTCCA GGAGTTCTTC
CAGGGCTTCG TCAACCACGC GCTGGTGTCG CTGCACATCG ACAACCTGCG CGGGCACAAC
ACCCACCACC AGATCGAGAC CGTGTTCAAG GCCTTCGGCC GCGCGCTGCG CATGGCGGTG
GAACTGGACC CGCGCATGGC CGGGCAGATG CCTTCGACCA AGGGCTGCCT GTAA
 
Protein sequence
MAERTAFVER NTLETQVKVS INLDGTGKAK LDIGVPFLEH MLDQIARHGL IDLDIECKGD 
LHIDDHHTVE DVGITLGQAF AKAVGDKKGM TRYGHSYVPL DEALSRVVID FSGRPGLQMH
VPFTRAVVGN FDVDLFQEFF QGFVNHALVS LHIDNLRGHN THHQIETVFK AFGRALRMAV
ELDPRMAGQM PSTKGCL