| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4253 |
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| Symbol | |
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| ID | 5106677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4657495 |
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| End bp | 4658232 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505517 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001189732 |
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| Protein GI | 146309267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000148572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGATTA TCCCCGCTAT CGATCTCAAG GACGGCGCCT GCGTGCGTCT GCGTCAGGGC
CGCATGGAAG ACTCCACGGT ATTTTCCGAT GACCCGGTGA GCATGGCCGC CAAGTGGGTC
GAGGGCGGTT GCCGGCGCCT GCATCTGGTC GACCTGAACG GTGCCTTCGA AGGTCAGCCG
GTCAATGGCG AAGTGGTCAC CGCCATCGCC AAGCGTTACC CGAACCTGCC GATCCAGATC
GGCGGCGGCA TCCGTACCCT GGAGACCATC GAGCACTACG TGCGCGCCGG CGTCAGCTAC
GTGATCATCG GCACCAAGGC GGTGAAAGAG CCGGAGTTCG TCACCGAGGC GTGCAAGGCC
TTCCCCGGCA AGGTCATCGT CGGCCTGGAC GCCAAGGACG GTTTCGTCGC CACCGACGGC
TGGGCGGAAG TCTCCAGTGT GCAGGCCACC GATCTGGCCA AGCGCTTCGA AGCCGATGGC
GTGTCTGCCA TCGTTTATAC CGACATCGCC AAAGACGGCA TGATGCAGGG CTGCAACGTC
GAAGCCACCG CTGCGCTGGC TGCCGCCAGC AAGATTCCGG TGATCGCCTC CGGCGGCATC
CACAACCTCG GCGATATCGA GAAGCTGCTG CTGGCTCGCT CGCCCGGCAT CATCGGCGCC
ATCACCGGCC GCGCCATCTA CGAAGGCACC CTGGATGTGG CCGAGGCGCA GGCCTTCTGC
GACAGCTTCA AGGGTTAA
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| Protein sequence | MLIIPAIDLK DGACVRLRQG RMEDSTVFSD DPVSMAAKWV EGGCRRLHLV DLNGAFEGQP
VNGEVVTAIA KRYPNLPIQI GGGIRTLETI EHYVRAGVSY VIIGTKAVKE PEFVTEACKA
FPGKVIVGLD AKDGFVATDG WAEVSSVQAT DLAKRFEADG VSAIVYTDIA KDGMMQGCNV
EATAALAAAS KIPVIASGGI HNLGDIEKLL LARSPGIIGA ITGRAIYEGT LDVAEAQAFC
DSFKG
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