| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4252 |
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| Symbol | |
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| ID | 5106676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4656652 |
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| End bp | 4657422 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505516 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001189731 |
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| Protein GI | 146309266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000131772 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTGG CCAAACGCAT CATTCCTTGC CTGGACGTGG ACAACGGCCG CGTGGTCAAG
GGCGTCAAGT TCGAGAACAT CCGCGATGCC GGTGACCCGG TGGAGATCGC TCGCCGCTAC
GATGAGCAGG GCGCCGACGA GATCACCTTC CTCGACATCA CCGCCAGCGT CGACGGTCGC
GACACCACCC TGCACACCGT CGAGCGCATG GCCAGCCAGG TATTCATCCC GCTCACCGTC
GGTGGCGGCG TGCGTACCGT GCAGGACATT CGCAACCTGC TCAATGCCGG CGCCGACAAG
GTATCGATCA ACACCGCCGC GGTATTCAAC CCCGAGTTCG TCGGCGAGGC CGCGGCGCGC
TTCGGCTCGC AGTGCATCGT CGTCGCCATC GACGCCAAGC GCGTATCGGC GCCGGGCGAG
CCGGGCCGCT GGGAAATCTT CACCCACGGC GGACGCAAGC CGACCGGCCT GGATGCCGTG
GAGTGGGCGC GCAAGATGGA AGGCCTCGGC GCCGGCGAGA TCCTGCTCAC CAGCATGGAT
CAGGACGGGG TGAAGAGCGG CTACGACCTG GGCGTGACCC GCGCCATCAG CGAGGCCGTG
CGCGTGCCGG TGATCGCCTC CGGTGGCGTC GGCAACCTGC AGCACCTGGC CGACGGCATC
CTCGAGGGCA AGGCCGACGC GGTGCTGGCC GCGAGCATCT TCCACTTCGG CGAGTACACC
GTGCCGGAGG CCAAGGCTTA TCTGGCCAGC CGTGGCATCG TGGTGCGTTA G
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| Protein sequence | MALAKRIIPC LDVDNGRVVK GVKFENIRDA GDPVEIARRY DEQGADEITF LDITASVDGR
DTTLHTVERM ASQVFIPLTV GGGVRTVQDI RNLLNAGADK VSINTAAVFN PEFVGEAAAR
FGSQCIVVAI DAKRVSAPGE PGRWEIFTHG GRKPTGLDAV EWARKMEGLG AGEILLTSMD
QDGVKSGYDL GVTRAISEAV RVPVIASGGV GNLQHLADGI LEGKADAVLA ASIFHFGEYT
VPEAKAYLAS RGIVVR
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