| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4249 |
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| Symbol | |
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| ID | 5106673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4653973 |
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| End bp | 4654728 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505513 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001189728 |
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| Protein GI | 146309263 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00199527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAATA CTCTGAAGAA AAGCCTGTTT GTCGCCCTGT TTCTCGCCAC CGGCTTCGCC
CACGCGCAGC TGCCGGCGGA TTACAAGGTG GTGCTGCTGA CCGAGAATTT CCCGCCCTTC
AACATGGCGG TGGACGACAA GAACTTCGCC CGCGACGACG GCATCGACGG CATCAGCGCC
GACATCGTGC GCGAGATGTT CAAGCGTGCC GGCATCGACT ACACCCTGAC CCTGCGCTTT
CCCTGGGATC GCCTGTACCG CCTGACCCTG GACAAGCCCA ACTACGGCCT GTTCTCCACC
ACCTACACGC CCGAGCGTCA GCCGCTGTTC AAGTGGGTCG GCCCGCTGGC CAAGACCGGC
TGGGTACTGC TCGCGGCGCC GGGCAACGAC ATCAAGGTGT CGAGCCTGCA GGACGCCGCC
CAGTACCGCA TCGGCGCCTA CAAGAACGAT GCGGTCAGCC AGCATCTGGA AAGCCAGGGC
CTGCAGCCGA TCAATGCCCT GCGTGATCAG GAGAACGTGA AGAAGCTGGT GCGCGGGCAA
ATCGACCTGT GGGCCACCAC CGACCCGGTC GGCCGTTACC TGGCCAAGCA GGAAGAAGTC
AGCGGCCTCA ATACCGTACT GCGCTTCAAC GATGCCGAGC TGTATCTGGC GCTGAACAAG
GACACTCCGG ACGAGGTCGT CGAGCGTCTG CAGAAGGCGC TGAACGAGAT GCGTGCCGAA
GGCTATATCG ACGATATCAC CGAGAATTAC CTGTAA
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| Protein sequence | MLNTLKKSLF VALFLATGFA HAQLPADYKV VLLTENFPPF NMAVDDKNFA RDDGIDGISA
DIVREMFKRA GIDYTLTLRF PWDRLYRLTL DKPNYGLFST TYTPERQPLF KWVGPLAKTG
WVLLAAPGND IKVSSLQDAA QYRIGAYKND AVSQHLESQG LQPINALRDQ ENVKKLVRGQ
IDLWATTDPV GRYLAKQEEV SGLNTVLRFN DAELYLALNK DTPDEVVERL QKALNEMRAE
GYIDDITENY L
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