| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4242 |
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| Symbol | |
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| ID | 5106666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4647661 |
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| End bp | 4648125 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505506 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001189721 |
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| Protein GI | 146309256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.175929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCACG TCATCCTCTT TCAACCGGAA ATTCCACCCA ATACCGGCAA CATTATCAGG
CTGTGCGCCA ACAGCGGCTG CCAACTGCAC CTGATCGAGC CACTGGGTTT CGAACTGGAC
GACAAGCGCC TGCGCCGCGC CGGCCTGGAC TATCACGAGT ACGCCACGCT CAAGCGCCAC
GCCGATCTGC AGAGCTGCCT GGACAGCCTC GGCCAGCCGC GCCTGTTCGC CTTCACCACC
AAGGGCTCGC AACCCTTCCA CGAGATCGCC TACCAGCCGG GCGATGCCTT TCTGTTCGGC
CCGGAAAGCC GCGGCCTGCC GGAGGAAGTA CGCAACGCCC TGCCACCCGA GCAGCGCGTG
CGCCTGCCGA TGCGCGCCGG TTGCCGCAGC CTGAATCTGT CCAACACCGT GGCCGTGACC
GTTTACGAGG CCTGGCGGCA GAACGGCTTT GCCGAAGCCG AGTAA
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| Protein sequence | MFHVILFQPE IPPNTGNIIR LCANSGCQLH LIEPLGFELD DKRLRRAGLD YHEYATLKRH
ADLQSCLDSL GQPRLFAFTT KGSQPFHEIA YQPGDAFLFG PESRGLPEEV RNALPPEQRV
RLPMRAGCRS LNLSNTVAVT VYEAWRQNGF AEAE
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