Gene Pmen_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4235 
Symbol 
ID5106659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4640075 
End bp4640812 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID640505499 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001189714 
Protein GI146309249 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAACT ATCCTGGCCG CCCGCAGGGC GCTGCGGCCG GCTATTTTCG GTGGCGGGTC 
AAGGCTTGTC GAGCCGTGTC GAGCGACGGC ACGGGCGCTG ATACAATCGC CGCCATGAAC
GAACTCAGCC TGCAAGACAG CTTTTCCAGC CTTATCGACG ACCTCGCCAG CCAGGGCTGG
TCGCAGCGGG CGCTATTCGC CCCAGAAATT CTGACCCGCG AACTGGCCGC GGAGTGCCAT
AAGCGTGCAC GCAGTGGCGA GCTCAGCGCA GCCGGCGTCG GCCGCGGCGG CGCCTTGCAG
ATTCAGGAAG GCATTCGCGG CGATCATATC CAGTGGCTGG AGCCCGGGCA GAGCGCGGCA
TGCGACCGCT ATCTGGCGCT GCTGGACGAG TTGCGTCAGG CGCTCAACCG TGCGCTGTTC
CTCGGCCTGG AGGACTTCGA GGGCCACTTC GCCTGCTACG CGCCGGGTGC CTTCTACCAG
CGCCATGTCG ATCGCTTCCG CGATGACGAC CGGCGTACGG TCTCGGCGGT GTTCTATCTG
AACGACAACT GGCTGCCCGA GCAGGGCGGT GCGTTGCGGT TGTATCTGGC CGATGGCCGT
GAGCATGACG TGCTGCCCGA GGCCGGCACC CTGGCGCTGT TCATGTCCGG CGACATGCCG
CACGAGGTGC TGCCGGCCAC GCGCGAACGG CTGTCGCTGA CCGGCTGGTT CAGGCGCCGC
GGCAGCGGGC CGCTCTGA
 
Protein sequence
MANYPGRPQG AAAGYFRWRV KACRAVSSDG TGADTIAAMN ELSLQDSFSS LIDDLASQGW 
SQRALFAPEI LTRELAAECH KRARSGELSA AGVGRGGALQ IQEGIRGDHI QWLEPGQSAA
CDRYLALLDE LRQALNRALF LGLEDFEGHF ACYAPGAFYQ RHVDRFRDDD RRTVSAVFYL
NDNWLPEQGG ALRLYLADGR EHDVLPEAGT LALFMSGDMP HEVLPATRER LSLTGWFRRR
GSGPL