Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4235 |
Symbol | |
ID | 5106659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4640075 |
End bp | 4640812 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505499 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_001189714 |
Protein GI | 146309249 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAACT ATCCTGGCCG CCCGCAGGGC GCTGCGGCCG GCTATTTTCG GTGGCGGGTC AAGGCTTGTC GAGCCGTGTC GAGCGACGGC ACGGGCGCTG ATACAATCGC CGCCATGAAC GAACTCAGCC TGCAAGACAG CTTTTCCAGC CTTATCGACG ACCTCGCCAG CCAGGGCTGG TCGCAGCGGG CGCTATTCGC CCCAGAAATT CTGACCCGCG AACTGGCCGC GGAGTGCCAT AAGCGTGCAC GCAGTGGCGA GCTCAGCGCA GCCGGCGTCG GCCGCGGCGG CGCCTTGCAG ATTCAGGAAG GCATTCGCGG CGATCATATC CAGTGGCTGG AGCCCGGGCA GAGCGCGGCA TGCGACCGCT ATCTGGCGCT GCTGGACGAG TTGCGTCAGG CGCTCAACCG TGCGCTGTTC CTCGGCCTGG AGGACTTCGA GGGCCACTTC GCCTGCTACG CGCCGGGTGC CTTCTACCAG CGCCATGTCG ATCGCTTCCG CGATGACGAC CGGCGTACGG TCTCGGCGGT GTTCTATCTG AACGACAACT GGCTGCCCGA GCAGGGCGGT GCGTTGCGGT TGTATCTGGC CGATGGCCGT GAGCATGACG TGCTGCCCGA GGCCGGCACC CTGGCGCTGT TCATGTCCGG CGACATGCCG CACGAGGTGC TGCCGGCCAC GCGCGAACGG CTGTCGCTGA CCGGCTGGTT CAGGCGCCGC GGCAGCGGGC CGCTCTGA
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Protein sequence | MANYPGRPQG AAAGYFRWRV KACRAVSSDG TGADTIAAMN ELSLQDSFSS LIDDLASQGW SQRALFAPEI LTRELAAECH KRARSGELSA AGVGRGGALQ IQEGIRGDHI QWLEPGQSAA CDRYLALLDE LRQALNRALF LGLEDFEGHF ACYAPGAFYQ RHVDRFRDDD RRTVSAVFYL NDNWLPEQGG ALRLYLADGR EHDVLPEAGT LALFMSGDMP HEVLPATRER LSLTGWFRRR GSGPL
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