Gene Pmen_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4233 
Symbol 
ID5106657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4638720 
End bp4639211 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content72% 
IMG OID640505497 
Producthypothetical protein 
Protein accessionYP_001189712 
Protein GI146309247 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA TACTGGTCAG CCGCTGCCTG CTCGGGCATC GGGTGCGCTA TGACGGCGGC 
GCTCACGGCC CCTTCGATCA GCTGCAACGG TGGCTGGACG AGGGGCGGGT GGTGGCGCTG
TGTCCGGAGG TGGCCGGCGG CCTGCCTACG CCGCGTCCGC CAGCGGAGAT TCGCGGCGGT
CAGGGCGGCG CGGTGCTGGA CGGCCTGTTG CCGGTGCTGA CGATCGAGGG CGAGGACGTT
ACGGCCGCGT TCGTCGACGG CGCCGAGCAG GCGCTGGCGC TGGTGCGCCA GCACGGCATC
CGCCTGGCCC TGCTCAAGGC GCGCAGCCCG TCGTGCGGCA ATCTGGAAAA CTACGATGGC
AGCTTCAGCG GCGTGCGCGT GGCGGGTGAG GGGGTGACCG CTGCGCTGCT CAAGCGAGCC
GGGGTCCAGG TGTTCAACGA GGGGCAGCTG GACGAGGCCG CCGCCGAGTT GGCGCGGCTG
GAGCAGGCGT GA
 
Protein sequence
MHKILVSRCL LGHRVRYDGG AHGPFDQLQR WLDEGRVVAL CPEVAGGLPT PRPPAEIRGG 
QGGAVLDGLL PVLTIEGEDV TAAFVDGAEQ ALALVRQHGI RLALLKARSP SCGNLENYDG
SFSGVRVAGE GVTAALLKRA GVQVFNEGQL DEAAAELARL EQA