| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4232 |
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| Symbol | |
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| ID | 5106656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4637376 |
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| End bp | 4638605 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505496 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001189711 |
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| Protein GI | 146309246 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCTCTCTCGA CAAGAGCAAG ATCAAGTTCC TTCTTCTCGA AGGCGTCCAC
CAGAATGCCG TGGACACTCT GAAGGCCGCC GGCTACAGCA ACATCGAGTA CCTCAAGGGC
GCGCTGTCGG GTGAAGAGCT GAAAGAAAAG ATCGCCGATG CCCACTTCAT CGGTATTCGC
TCGCGCACCC AGCTGACCGC CGAAGTCTTC GACTGCGCGA AGAAGCTGGT CGCCGTCGGC
TGCTTCTGCA TCGGTACCAA CCAGGTCGAC CTGGACGCCG CCCGCGAGCG CGGCATCGCC
GTCTTCAACG CACCCTACTC CAACACCCGT TCGGTGGCCG AACTGGTACT GGCCGAGGCC
ATCCTGCTGC TGCGCGGCAT TCCGGAGAAG AACGCCTCCT GCCACCGCGG CGGCTGGATC
AAGTCGGCGG CCAACTCCTT CGAGATCCGC GGCAAGAAGC TGGGCATCAT CGGTTACGGC
TCCATCGGCA CCCAGCTCTC GGTACTGGCC GAGGCCCTGG GCATGCAGGT GTACTTCTAC
GACACCGTGA CCAAGCTGCC GCTGGGCAAC GCGCAGCAGA TCGGCGATCT GTACGAACTG
CTGGGCCTGT GCGACATCGT CTCGCTGCAC GTGCCGGAGC TGCCGTCCAC CCAGTGGATG
ATCGGCGAGA AGGAAATCCG CGCCATGAAG AAGGGCGGCA TCCTGATCAA CGCCGCGCGC
GGTACCGTGG TCGAACTGGA TCACCTGGCC AACGCGATCA AGGACGAACA CCTGATCGGC
GCCGCCATCG ACGTGTTCCC GGTCGAGCCC AAGTCCAATG ACGAAGAGTT CGAAAGCCCT
CTGCGCGGCC TGGATCGCGT GATCCTCACC CCGCACATCG GTGGCTCCAC CGCCGAAGCG
CAGGCCAACA TTGGCCTGGA AGTGGCCGAG AAGCTGGTCA AGTACAGCGA CAACGGCACC
TCGGTGTCCT CGGTCAACTT CCCCGAAGTG GCCCTGCCGG CGCATCCGGG CAAGCACCGT
CTGCTGCACA TCCATGCCAA CGTTCCCGGC GTGATGAGCG AGATCAACAA GGTGTTCGCC
GACAACGGCA TCAACATCTC CGGCCAGTTC CTGCAGACCA ACGACAAGGT CGGCTACGTG
GTGATCGACG TCGACGCCGA GTACTCGGAC CTGGCGCTGG AGAAGCTGCA GCGCGTCAAT
GGCACCATCC GCAGCCGCGT CCTGTTCTAA
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| Protein sequence | MSKTSLDKSK IKFLLLEGVH QNAVDTLKAA GYSNIEYLKG ALSGEELKEK IADAHFIGIR
SRTQLTAEVF DCAKKLVAVG CFCIGTNQVD LDAARERGIA VFNAPYSNTR SVAELVLAEA
ILLLRGIPEK NASCHRGGWI KSAANSFEIR GKKLGIIGYG SIGTQLSVLA EALGMQVYFY
DTVTKLPLGN AQQIGDLYEL LGLCDIVSLH VPELPSTQWM IGEKEIRAMK KGGILINAAR
GTVVELDHLA NAIKDEHLIG AAIDVFPVEP KSNDEEFESP LRGLDRVILT PHIGGSTAEA
QANIGLEVAE KLVKYSDNGT SVSSVNFPEV ALPAHPGKHR LLHIHANVPG VMSEINKVFA
DNGINISGQF LQTNDKVGYV VIDVDAEYSD LALEKLQRVN GTIRSRVLF
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