Gene Pmen_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4228 
Symbol 
ID5106652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4633582 
End bp4633929 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content61% 
IMG OID640505492 
Producthypothetical protein 
Protein accessionYP_001189707 
Protein GI146309242 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA CCGCTTTCGC TCTGATGGTT CTGCCACTGC TCAGCACCGC TGCCTTCGCC 
ACCGGTTATA CCGGCCCGGG TGCCACGCCG CAGGTCACCA CCGTGGCCGC CGCGCTGGAG
GCCGCCGACG ATACTCATGT TGTGCTGGAA GGGCAGATCG TCAAGCGCCT GCAGGATGAA
CTGTATGAAT TCAAGGATGG CACCGGCACC ATCCAGGTCG AGATCGACGA CGAAGACTGG
CCGGGCCAGA GCGTTTCCGA GAACGCCAAG GTGCGCCTGA CCGGTGAGGT CGACAAGGAC
TTCAACAGTC GCGAGATCGA CGTCGATCGG GTCGAACTGA TCAACTGA
 
Protein sequence
MKRTAFALMV LPLLSTAAFA TGYTGPGATP QVTTVAAALE AADDTHVVLE GQIVKRLQDE 
LYEFKDGTGT IQVEIDDEDW PGQSVSENAK VRLTGEVDKD FNSREIDVDR VELIN