| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4221 |
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| Symbol | |
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| ID | 5106645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4625865 |
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| End bp | 4627379 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505485 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001189700 |
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| Protein GI | 146309235 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC AGTACGTGAA GAAGATCCTC ACCTCGCGCG TTTACGACGT CGCGGTGGAA
ACCCCGCTGC AACCCGCCCG CCAGCTCAGT GAGCGGCTGG GCAGCCAGAT TCTGCTCAAG
CGCGAGGATC TGCAGCCGGT GTACTCGTTC AAGATTCGCG GCGCCTACAA CAAGCTGGCG
CAGCTCTCGG CCGAAGAACT GGCGCGCGGC GTGGTTACCG CCTCGGCCGG CAACCACGCC
CAGGGTCTGG CACTGGCGGC CAAGCACCTG GGGGTGAAGG CGACCATCGT CATGCCGCGC
ACCACGCCGG AGCTGAAGGT GCAGGGCGTG CGTTCGCGTG GCGGCAAGGT GGTGCTGCAC
GGCGATGCCT TCCCCGAGGC GCTGGCGCAT TCGCTGAAAC TGGTGGAGGA GAAGGGCTAC
ACCTACATTC ACCCCTACGA CGATCCGCTG GTGATCGCCG GGCAGGGCAC CGTGGCCATG
GAGGTGCTGC GCCAGCACCA GGGCCATATC GACGCCATCT TCGTGCCGGT CGGCGGCGGC
GGCCTGATCG CCGGCATCGC CGCCTACGTC AAATACCTGC GCCCGGAAAT CAAGGTGATC
GGCGTCGAGC CGGACGACTC CAACTGCCTG CAGGCCGCCA TGGCCGCGGG TGAGCGCGTG
GTGCTGCCGA GCGTCGGGCT GTTCGCCGAC GGCGTGGCAG TGGCGCAGAT CGGCCAGCAC
ACCTTCGACA TCTGCAAGCA GCATGTCGAC GAGGTGATTA CCGTCAGCAC CGATGAAATC
TGCGCGGCGA TCAAGGACAT CTACGACGAC ACCCGCTCGA TCACCGAGCC GGCCGGCGCG
CTGGCGGTGG CCGGCATCAA GAAGTACGTC GAGCGCCAGG GCGCCAATGG CGAAGTGCTG
GTGGGCATCG ATTCGGGCGC CAACGTCAAC TTCGACCGTC TGCGCCACGT TGCCGAGCGC
GCCGAACTGG GCGAGAAGCG CGAGGCGATC ATCGCCGTGA CCATCCCCGA GCAGCCGGGC
AGCTTCAAGG CCTTCTGCGA AGCGGTGGGC AAACGCCAGA TCACCGAGTT CAACTACCGC
TACCACACCG ACCGCGAGGC GCACATCTTC GTCGGCGTGC AGACCCACCC GGAGAACGAC
CCACGCCAGG CGCTGGTCGA GGGCCTGCGC GCGCAGGGCT TCCCGGTGCT GGACCTGACC
GACAACGAGC TGGCCAAGCT GCATATCCGC CATATGGTCG GTGGCCATGC GGCGCAGGTC
AGCGACGAGA TGGTGCTGCG CTTCGAGTTT CCCGAGCGCC CCGGCGCGCT GTTCAACTTC
CTGCAGAAGC TCGGCGGGCG CTGGAACATC TCCATGTTCC ACTACCGCAA CCACGGCGCC
GCCGATGGCC GTGTGGTCGC CGGCCTGCAG GTGCCCGCCG ACGAGCGCCA CCTGGTACCC
GCGGCGCTGG ACGCCATCGG TTACCCCTAC TGGGACGAGA GCGACAACCC GGCTTATCGC
CTGTTTCTCG GCTGA
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| Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLQPARQLS ERLGSQILLK REDLQPVYSF KIRGAYNKLA
QLSAEELARG VVTASAGNHA QGLALAAKHL GVKATIVMPR TTPELKVQGV RSRGGKVVLH
GDAFPEALAH SLKLVEEKGY TYIHPYDDPL VIAGQGTVAM EVLRQHQGHI DAIFVPVGGG
GLIAGIAAYV KYLRPEIKVI GVEPDDSNCL QAAMAAGERV VLPSVGLFAD GVAVAQIGQH
TFDICKQHVD EVITVSTDEI CAAIKDIYDD TRSITEPAGA LAVAGIKKYV ERQGANGEVL
VGIDSGANVN FDRLRHVAER AELGEKREAI IAVTIPEQPG SFKAFCEAVG KRQITEFNYR
YHTDREAHIF VGVQTHPEND PRQALVEGLR AQGFPVLDLT DNELAKLHIR HMVGGHAAQV
SDEMVLRFEF PERPGALFNF LQKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPADERHLVP
AALDAIGYPY WDESDNPAYR LFLG
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