Gene Pmen_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4210 
Symbol 
ID5106634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4613875 
End bp4615026 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID640505474 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001189689 
Protein GI146309224 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACCA AACCGCTTCG CAGCTGGCTG CTCTGCGCTG GCCTGTTGCT ACCGACCCTC 
GGCCTCGCCG CGCCAGCCAA GCCCGACAGC GTGCAGGCCG CCATCGACTG GGCCCAGCAA
CAGCCCCTGG CGCACAAGGG CAAGCCCCAC GGCGACGCCA AACCGCTGGT CATCGCCCAC
CGCGGCGCCA GCGGTTACGT CCCCGAGCAC ACCCTGGCCG CCTACGCCCT GGCCATCCTG
CAGGGCGCGG ATTACGTCGA GCCGGACCTG GTGATGACCC GCGACGGCCA GCTGGTGGCC
CGTCACGACA ACGAACTGGG GCTGACCACC GACGTGGCGC AGCGTCCGGA GTTCGCCAAC
CGCAAGCGCA CCCAGACGGT GGACGGCGTC AGCCTGGAAG GCTGGTTCAG CGAGGACTTC
AGCCTGGCCG AACTCAAGAC CCTGCGCGCC ATCGAACGCA TCCCGCAGGT GCGCCCGGCC
AATACCCGTT TCGACGGCCA GTTCGAGATC CCAACCCTGC AGGAGATCAT CGACCTGGTG
AAGAGCCTGC AACTCAGCCA GCAGCGGGTC ATCGGCCTGT ACCCGGAAAC CAAGCACCCG
ACCCACTTCC AGCAGATCGG CCTGGCCATG GAGCAGCCAC TGGTCAAGGT GCTTAAGCGC
AACGGTTACA ACAGCGCCAA GGCGCCGGTG TACATCCAGT CCTTCGAGGT GGAGAACCTC
AAGACCCTCA GCCGTCTGAC CCAGGTGCGC CTGGTGCAAC TGCTGTGGAC CGAGGGCCAA
CCCTATGACC AGCAGGTGCT CGGCACCGGT CTGAGCTACG CGCAGATGAT CACGCCCAAG
GGCCTGAAGG CCATCGCCCG CTACGCCAGC GGCATCGGCC CGGAGAAAGG CATGGTCATC
CCGCGCGACG CCGCCGGCAA CCTGACCACG CCCACCAGCC TGGTGCGTGA CGCCCATGCG
GCCAAGCTCA AGGTCCACCC CTACACTTTC CGCGCCGAGA ACGCCTTCCT GCCCACCAGC
CTGCGCAACG GCAGCGAGCC GGCCGAGCGC GGCGATATCG AGGCAGAGCT GCGCGCCTTC
CTCGCCACCG GCATCGACGG TCTGTTCATC GACCAGCCGG ACATCGCCGT GCGCCTGCGC
CAGCAGCGCT GA
 
Protein sequence
MLTKPLRSWL LCAGLLLPTL GLAAPAKPDS VQAAIDWAQQ QPLAHKGKPH GDAKPLVIAH 
RGASGYVPEH TLAAYALAIL QGADYVEPDL VMTRDGQLVA RHDNELGLTT DVAQRPEFAN
RKRTQTVDGV SLEGWFSEDF SLAELKTLRA IERIPQVRPA NTRFDGQFEI PTLQEIIDLV
KSLQLSQQRV IGLYPETKHP THFQQIGLAM EQPLVKVLKR NGYNSAKAPV YIQSFEVENL
KTLSRLTQVR LVQLLWTEGQ PYDQQVLGTG LSYAQMITPK GLKAIARYAS GIGPEKGMVI
PRDAAGNLTT PTSLVRDAHA AKLKVHPYTF RAENAFLPTS LRNGSEPAER GDIEAELRAF
LATGIDGLFI DQPDIAVRLR QQR