Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4210 |
Symbol | |
ID | 5106634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4613875 |
End bp | 4615026 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505474 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001189689 |
Protein GI | 146309224 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA AACCGCTTCG CAGCTGGCTG CTCTGCGCTG GCCTGTTGCT ACCGACCCTC GGCCTCGCCG CGCCAGCCAA GCCCGACAGC GTGCAGGCCG CCATCGACTG GGCCCAGCAA CAGCCCCTGG CGCACAAGGG CAAGCCCCAC GGCGACGCCA AACCGCTGGT CATCGCCCAC CGCGGCGCCA GCGGTTACGT CCCCGAGCAC ACCCTGGCCG CCTACGCCCT GGCCATCCTG CAGGGCGCGG ATTACGTCGA GCCGGACCTG GTGATGACCC GCGACGGCCA GCTGGTGGCC CGTCACGACA ACGAACTGGG GCTGACCACC GACGTGGCGC AGCGTCCGGA GTTCGCCAAC CGCAAGCGCA CCCAGACGGT GGACGGCGTC AGCCTGGAAG GCTGGTTCAG CGAGGACTTC AGCCTGGCCG AACTCAAGAC CCTGCGCGCC ATCGAACGCA TCCCGCAGGT GCGCCCGGCC AATACCCGTT TCGACGGCCA GTTCGAGATC CCAACCCTGC AGGAGATCAT CGACCTGGTG AAGAGCCTGC AACTCAGCCA GCAGCGGGTC ATCGGCCTGT ACCCGGAAAC CAAGCACCCG ACCCACTTCC AGCAGATCGG CCTGGCCATG GAGCAGCCAC TGGTCAAGGT GCTTAAGCGC AACGGTTACA ACAGCGCCAA GGCGCCGGTG TACATCCAGT CCTTCGAGGT GGAGAACCTC AAGACCCTCA GCCGTCTGAC CCAGGTGCGC CTGGTGCAAC TGCTGTGGAC CGAGGGCCAA CCCTATGACC AGCAGGTGCT CGGCACCGGT CTGAGCTACG CGCAGATGAT CACGCCCAAG GGCCTGAAGG CCATCGCCCG CTACGCCAGC GGCATCGGCC CGGAGAAAGG CATGGTCATC CCGCGCGACG CCGCCGGCAA CCTGACCACG CCCACCAGCC TGGTGCGTGA CGCCCATGCG GCCAAGCTCA AGGTCCACCC CTACACTTTC CGCGCCGAGA ACGCCTTCCT GCCCACCAGC CTGCGCAACG GCAGCGAGCC GGCCGAGCGC GGCGATATCG AGGCAGAGCT GCGCGCCTTC CTCGCCACCG GCATCGACGG TCTGTTCATC GACCAGCCGG ACATCGCCGT GCGCCTGCGC CAGCAGCGCT GA
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Protein sequence | MLTKPLRSWL LCAGLLLPTL GLAAPAKPDS VQAAIDWAQQ QPLAHKGKPH GDAKPLVIAH RGASGYVPEH TLAAYALAIL QGADYVEPDL VMTRDGQLVA RHDNELGLTT DVAQRPEFAN RKRTQTVDGV SLEGWFSEDF SLAELKTLRA IERIPQVRPA NTRFDGQFEI PTLQEIIDLV KSLQLSQQRV IGLYPETKHP THFQQIGLAM EQPLVKVLKR NGYNSAKAPV YIQSFEVENL KTLSRLTQVR LVQLLWTEGQ PYDQQVLGTG LSYAQMITPK GLKAIARYAS GIGPEKGMVI PRDAAGNLTT PTSLVRDAHA AKLKVHPYTF RAENAFLPTS LRNGSEPAER GDIEAELRAF LATGIDGLFI DQPDIAVRLR QQR
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