| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4202 |
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| Symbol | |
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| ID | 5106626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4605795 |
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| End bp | 4607030 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505466 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001189681 |
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| Protein GI | 146309216 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCATCGC TCACCACCAG CGAAGCCGGC CAAGCCGCCA GTGCCCGCCG CAAGAAGCGC
CTCACCGCCT TCCTGTTCGT GGCGCCGCTG CTGCTGTTCA TCCTCGTCAC CTTCGTCGCC
CCCATCGGCA GCATGCTGTG GCGCAGCGTG TATCACCCGA CGGTGGCCGA GCTGATCCCC
CTGACCCTGG CCGAACTGGA GCGCTGGGAC GATCACAAGC AGTTGCCCGA CGAACGCACG
CTGAGCGTGT TCGTCAACGA ACTGCACGCC CTCGACAAGC AGCGCCTGTC CGGCAAGCTG
TCCGAGGAGT TCAACCGCGC CTTCACCGGC ATGTCCAGCG TGGTCAAATC CACCGCGCGG
CGCATCGGCC GGATGGATGC CGAAGCATTG TCGAGCCAGG GCGTCGAGAC CCTGCTCGAG
AGCCACCGCA ACTGGAGCCG CCCCGAGCTG TGGTACGCCA TCGAGCGTGC CGGCAAGGTC
TACACCTACG ACTACTACCT GACCGCCCTG GACCTGGAGC TGCATCCCGA TGAAGGCATC
CAGGTGCGCC AGGACACGCA GATCTATCTG CAGCTGTACT CCAAGACCCT GAACATGGCG
CTGGTCATCA CTCTGCTCTG CGCCCTGCTC GGCTACCCGC TGGCCTACTA CCTGGCCGGG
CTGCCGTCGA ACCGCGCCAA CCTGCTGCTG GTGCTGGTAC TGCTGCCGTT CTGGACGTCC
CTGCTGGTGC GCACCACCTC GTGGATCGCC CTGCTGCAGA CCAACGGCGT GATCAATTCC
ACGCTCATGG GCATCGGCCT GATCAGCCAG CCCTTCGAGA TGCTCTACAC CTCGTTCGCC
ACCGTGGTGG CGATGACCCA CATCCTGCTG CCCTTCATGG TGCTGCCGCT GTACAGCGTG
ATGCGCGGCA TCGACCCCAG CTACATGCGC GCAGCGCTGA GCCTGGGCGA CAAGCCGATC
CCGGCCTTCG CCCGCATCTA CTTCCCGATG ACCCTGCCCG GCCTCAGCGC CGGAGCGCTC
CTGGTGTTCA TCATCTCGGT GGGCTACTAC ATCACCCCGG CGCTGGTGGG CGGCACGGAC
GGGCAGATGA TCAGCAACAT CATCGCCTTC CACATGCAAC GCTCGAACAA CTGGGAGCTG
GCCGCCGCAC TGGGCTCGCT GCTGCTGGGG CTGATCCTGC TGCTGTACTG GGTCTACGAC
CGCTTCGTCG GCGCCAGCAA TATCAAGTTG GGATGA
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| Protein sequence | MSSLTTSEAG QAASARRKKR LTAFLFVAPL LLFILVTFVA PIGSMLWRSV YHPTVAELIP
LTLAELERWD DHKQLPDERT LSVFVNELHA LDKQRLSGKL SEEFNRAFTG MSSVVKSTAR
RIGRMDAEAL SSQGVETLLE SHRNWSRPEL WYAIERAGKV YTYDYYLTAL DLELHPDEGI
QVRQDTQIYL QLYSKTLNMA LVITLLCALL GYPLAYYLAG LPSNRANLLL VLVLLPFWTS
LLVRTTSWIA LLQTNGVINS TLMGIGLISQ PFEMLYTSFA TVVAMTHILL PFMVLPLYSV
MRGIDPSYMR AALSLGDKPI PAFARIYFPM TLPGLSAGAL LVFIISVGYY ITPALVGGTD
GQMISNIIAF HMQRSNNWEL AAALGSLLLG LILLLYWVYD RFVGASNIKL G
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