| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4201 |
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| Symbol | |
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| ID | 5106625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4604638 |
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| End bp | 4605711 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505465 |
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| Product | spermidine/putrescine-binding periplasmic protein-like protein |
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| Protein accession | YP_001189680 |
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| Protein GI | 146309215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGAT CACTGACTAC CAGCGTTTCC ACCTTCGCCC TGGTGGCGGC ACTGGGACTC
ACCGCGAGCA CCGCAACGGC CCAGGACAGC CTCACCGTGG TGTCCTGGGG CGGCGCCTAT
GGCGCGGCGC AGAAGAAGCA CGTCATCGAC CCGTATCAGA AGGAAACCGG GGTCAAGGTG
CTGTTCGAGG ACTACTCCGG CGGCGTCGCC GAGATCAAGG CGCAGGTCGA GTCGGGCAAC
ATCCAGTGGG ACGTGGTCGA CTTCGAGGTG ATCGACCTCG AGCGCGCCTG CTCCGAAGGC
CTGCTGGAAA GCCTCGACCA CAGCGCCCTG CCGCCCGGTA TCGATGGCAC CCCGGCCGCG
CAGGACTTCA TCCCCGAAGC CCTGGCCAGC GAGTGCGCGG TGGGCAATAT CGTCTGGTCG
GTGGTGTTCG CCTACAACCA GAACACCATC GGCGGCACCA AGGCCAGCAG CATTGGCGAC
TTCTTCGACA CCAGCAAGAT TCCCGGCAAG CGCGCCATGC GCAAGCGCCC GCAGGTGAAC
ATGGAGTGGG CGCTGCTGGC CGATGGCGTG GCGCCCGCCG AAGTCTACGA GGTGCTCGCC
ACCCCCGAAG GCCAGCAGCG CGCCTTCGAC AAGCTGGCCA GCATCAAGAA GGACATCGTC
TGGTTCGACT CCTGGTCGCA GGCGCCGCAG CTGCTCAATG ACGGCGGCGC CGTGCTGGTG
CAGTCGGCCA ACGGCCGCTT CTACGACGCC ATCGTGCAGG AGAAGAAACC CTTCGAGATC
GTCTGGGACG GCCACGTCTA CGACCTCGAC GCCTGGGCCA TCGTCAAGGG CTCGAAGAAG
AAGGACCTGG CGATGGAGTT CATCAAGTAC GCCACCGGCT CCAAGCCGCT GGCCGGCATG
CCGGACGTGG CCTATGGCCC GACCCGCAAG TCGTCCATGC CGCTGGCCGA CCAGAGCGCC
ACCCCGCACC TGCCCACCGC CCACCTGGAC AAAGGCATCC AGGCCGGCTC GGAGTTCTGG
GCCGACTACG GCGAATCGCT GGGCGAGAAG TTCAACGAGT GGCTGTTGAA GTAA
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| Protein sequence | MARSLTTSVS TFALVAALGL TASTATAQDS LTVVSWGGAY GAAQKKHVID PYQKETGVKV
LFEDYSGGVA EIKAQVESGN IQWDVVDFEV IDLERACSEG LLESLDHSAL PPGIDGTPAA
QDFIPEALAS ECAVGNIVWS VVFAYNQNTI GGTKASSIGD FFDTSKIPGK RAMRKRPQVN
MEWALLADGV APAEVYEVLA TPEGQQRAFD KLASIKKDIV WFDSWSQAPQ LLNDGGAVLV
QSANGRFYDA IVQEKKPFEI VWDGHVYDLD AWAIVKGSKK KDLAMEFIKY ATGSKPLAGM
PDVAYGPTRK SSMPLADQSA TPHLPTAHLD KGIQAGSEFW ADYGESLGEK FNEWLLK
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