Gene Pmen_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4180 
Symbol 
ID5106604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4582826 
End bp4583809 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content68% 
IMG OID640505444 
Productalpha/beta hydrolase fold 
Protein accessionYP_001189659 
Protein GI146309194 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG AATTTCGCCC CGCCTGGTGG CTCCCCGGCC CGCATCTGCA GACGCTGTGG 
AACCCCTTCT GTCGCAAGCC GCCGCAACTG CAGCGGCAGC GCGAGCGGCT GTGGCTGGAC
GATGGCGACT TTCTCGACCT CGACTGGCAT GGCCCGCATG ACGCCCATGC GCCGCTGGTG
CTGGTGCTGC ATGGCCTGAC CGGCAGTTCC AATTCGCTCT ACGTGCTCGG CCTGCAACAG
GCCCTGGCCG CGCGCGGCTG GGCCAGCGTG GCGCTGAACT GGCGCGGCTG CTCGGGTGAA
CCCAATCTGC TGCCGCGCGG CTATCACTCC GGCGCCAGCG AAGATCTGGC ATCAGCCGTG
GCCCACCTGC GCGCGCAACG GCCGATGGCG CCGCTGTACG CCGTCGGCTA TTCGCTGGGC
GGCAACGTGC TGCTCAAGTA CCTGGGCGAA AGCGGCGCGC AGAGCCAGCT GCAGGCCGCG
GTGGCGGTGT CGGTGCCGTT TCGTCTGGAT CAGTGCGCCG ACCGCATCGG CCTGGGCTTC
TCGCGGGTGT ACCAGGCGCA TTTCATGCGC GAGATGGTCG CCTATGTCAG CAACAAGCAG
CGCCTGTTCA CCGAGCAGGG CCACAGCGAG CGCCTGTCGG TGCTGGAGCG CCTCGGCCCG
CTGGACGGCA TGCGCACCTT CTGGGACTTC GACGGGCGCA TCACCGCGCC GCTGCACGGC
TTCGCCGATG CCCACGATTA CTACCGGCGC GCCTCCAGCC GCTTCTACCT GGGCGACATT
CGCACGCGCA CGCTGATCAT CCAGGCCGAG GACGATCCCT TCATCTTCCG TCACAGCCTG
CCCGAGGCCA GCGAGCTGGC CCCCGGTACC GAGTTCGAGC TGCATGCCAA GGGCGGTCAT
GTCGGCTTCG TCGAAGGCAG CCCGCGCCGC CCCGTCTACT ATCTGGAGCG GCGCATTCCC
GAGTGGCTCG GCGCACTCAC CTGA
 
Protein sequence
MNTEFRPAWW LPGPHLQTLW NPFCRKPPQL QRQRERLWLD DGDFLDLDWH GPHDAHAPLV 
LVLHGLTGSS NSLYVLGLQQ ALAARGWASV ALNWRGCSGE PNLLPRGYHS GASEDLASAV
AHLRAQRPMA PLYAVGYSLG GNVLLKYLGE SGAQSQLQAA VAVSVPFRLD QCADRIGLGF
SRVYQAHFMR EMVAYVSNKQ RLFTEQGHSE RLSVLERLGP LDGMRTFWDF DGRITAPLHG
FADAHDYYRR ASSRFYLGDI RTRTLIIQAE DDPFIFRHSL PEASELAPGT EFELHAKGGH
VGFVEGSPRR PVYYLERRIP EWLGALT