Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4177 |
Symbol | |
ID | 5106601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4580463 |
End bp | 4581923 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640505441 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_001189656 |
Protein GI | 146309191 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.733027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG AGCACCGCCG CCTGGGCCTG CTCGGCCTAA TCCTGTCCGC TGCCCTGGCG CTGGGCGCCT GCGCCAGCCT GTCCGCTCCG ACGCTGAGCG GCGATGCCGC GAAACTGCAG TCGTTGGCCG AGCTCGATGG CCAGGCACCG ACCCGCCGCA CCCTGGAAAT CCAGACCTGG ACCACGCCAC AAGGCGCCAA GGTGCTGTTC GCCCCGGCCC GTGAGCTGCC GATGTTCGAC CTGCGCCTGA CCTTCGCTGC CGGCAGCAGC CAGGACAACG GCGTGCCGGG CCTGGCCACC CTGACCAACG CCATGCTCAA CGAAGGCGTA CCGGGCAAGG ATGTCGGCGC CATCGCCGCC GGCTTCGAGG GCCTGGGCGC CGAATTCGGC AACGGTGCCT ACCGCGACAT GGCCGTGGCC AGCCTGCGCA GCCTGAGCGC CAAGGAGCAG CGCGACCCGG CACTGGCACT GTTCGCCGAG GTCCTGGGCA AACCGACCTT CCCCGAGGAT TCGCTGGCGC GGATCAAGAA CCAGCTGCTG GCCGGCTTCG AGTTCCAGAA GCAGAACCCC GGCAAGCTGG CCAGCCTGAA GCTGTTCGAG CGCCTGTACG GCCAGCACCC CTACGCGCAT CCGAGCGACG GTACCGCGCA GTCGATACCG ACCATCGGCC GTCAGCAGCT GCAGGCCTTC CACGCTCGTG CCTACGCGGC CGGCAACGCG GTGATCGCCC TGGTCGGCGA CCTCTCGCGC AGCGAAGCCG AGGCCATCGC CAACCAGGTG TCCGCAACCC TGCCGCAGGG GCCGGCACTG CCGCGCATCG CCCAGCCGCA AGCACCCAAG CCGGGCGTTA GCCACATCGA ATTTCCCTCC AACCAGACCC ACCTGCTGAT CGCCCAGCTC GGCATCGACC GTCGCGACCC GGACTACGCC GCGCTCTACT TGGGCAACCA GATTCTCGGC GGCAGCGGCT TCGGCACCCG CCTGATGACC GAAGTGCGCG AGAAGCGCGG CCTGACCTAC GGCGTCTACT CAGGCTTCAG CGCCATGCAG GCGCGCGGCC CGTTCATGAT CAACCTGCAG ACCCGTGCGG ACCTGAGCGA GGGCACCCTG GCACTGGTCA AGCAGCTGCT CGCCGACTAT CTGCGCGAAG GCCCGACCCA GCAGGAGCTG GACAACGCCA AGCGTCAGCT GGCCGGCAGC TTCCCGCTGT CCACCGCGAG CAACGCCGAT ATCGTCGGCC AGTTGGCGTC GATGGGCTTC TACGACCTGC CGCTGAGCTA TCTGGACGAC TTTATGCGTG ACGTCCAGGC GCTGAGCATC GAACAGGTCA AGACCGCCAT GGCCAAGCAC CTCGACCCCG AGGCGCTGGT GGTGGTCACG GCCGGCCCGA GCGTGACGCA GAAAGAGCTG CCGCCGCCCA ACGAGGATCC GGTCGAGCAG CCCAGCACGG TGCCGCACTG A
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Protein sequence | MKTEHRRLGL LGLILSAALA LGACASLSAP TLSGDAAKLQ SLAELDGQAP TRRTLEIQTW TTPQGAKVLF APARELPMFD LRLTFAAGSS QDNGVPGLAT LTNAMLNEGV PGKDVGAIAA GFEGLGAEFG NGAYRDMAVA SLRSLSAKEQ RDPALALFAE VLGKPTFPED SLARIKNQLL AGFEFQKQNP GKLASLKLFE RLYGQHPYAH PSDGTAQSIP TIGRQQLQAF HARAYAAGNA VIALVGDLSR SEAEAIANQV SATLPQGPAL PRIAQPQAPK PGVSHIEFPS NQTHLLIAQL GIDRRDPDYA ALYLGNQILG GSGFGTRLMT EVREKRGLTY GVYSGFSAMQ ARGPFMINLQ TRADLSEGTL ALVKQLLADY LREGPTQQEL DNAKRQLAGS FPLSTASNAD IVGQLASMGF YDLPLSYLDD FMRDVQALSI EQVKTAMAKH LDPEALVVVT AGPSVTQKEL PPPNEDPVEQ PSTVPH
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