| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4175 |
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| Symbol | |
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| ID | 5106599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4577529 |
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| End bp | 4578956 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505439 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001189654 |
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| Protein GI | 146309189 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0143973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGTT CCAATGACGA CAAGAAGTCG CCGGCCGATG TCGGCGCGCA GAATCCGCCT
GTGACCGAAG AAAAGAAATC CCTGTTCGGC TGGCTGCGCA AGAAGCCGGC GGAACCCGCT
GCGCCCGCCG AGGCGCCCGC GAGCGAGCCG CAAGTCGTGC CCGCGCCCGA GGTGGAATCG
GACGCCAATC AGGCGCCGCT GCCCGCCGCG GCGCCCGAAG AGCCCGTGGC GGCGGTGCCG
GTCGAGCGCC ACGAGCCGTC CGCGCCGGCC GCGCCTGGCG TAGAAACGCC GACAGCAGCC
GTGGCGGATG CCGAGCCGGT GCAACCGCTG CAACCGGCGC AGCCGCCCGA GGCCGAGGGC
AAGTCCGGTT TCTTCTCGCG TCTGCTCGGC GGCGACAATG CGCCCGTGCC AGCCGCTGCC
CCGCCGGCCG AAACGCCTGC CCCGGTTGCG CCGAGCGAGG CCGCGCCGCC TGCTGCGCTG
CCGGCCACCC AGGACAAGCC GAGCTTCTTC GCCCGCCTCA AACAGGGCCT GTCCAAGACC
AGCGCCAGTC TGGGCGAAGG CATGGCCAGC CTGTTCCTCG GCAAGAAGGC CATCGACGAC
GACCTGCTCG ACGATCTGGA AACCCGCCTG CTCACCGCCG ATGTCGGCGT CGAGGCGACC
ACCACCATCA TCGGCAACCT GACCAAACGT GTGGCACGCA AGGAGCTGGC CGATAGCGGC
GCGCTGTACA AGGCGCTGCA GGAAGAATTG GTGACCCTGC TCAAGCCGGT CGAGCAGCCC
CTGGTCATCG ACAGTGCCAA GCAGCCCTAC GTGATCCTCG TGGTCGGGGT GAACGGTGTG
GGCAAGACCA CCACCATCGG CAAGCTGGCC AAGAAGCTGC AACTGGACGG CAAGAAGGTC
ATGCTCGCCG CCGGCGATAC CTTCCGTGCC GCCGCGGTGG AGCAGCTGCA GGTCTGGGGT
GAGCGCAACA ACATCGCGGT GATCGCCCAG CACACCGGCG CCGACTCGGC CTCGGTGATC
TTCGATGCGG TGCAGGCCGC CAAGTCGCGC GGCATCGACG TGCTGATCGC CGATACCGCC
GGGCGCCTGC ACACCAAGGA CAACCTGATG GAAGAGCTGA AGAAGGTCCG TCGGGTGATC
GGCAAGCTGG ACGAGACCGC GCCGCACGAA GTGCTGCTGG TGCTCGATGC CGGCACCGGC
CAGAACGCCA TCAGCCAGGC CAAGCAGTTC GACCAGACGG TGAACCTCAC CGGCCTGGCG
CTGACCAAAC TCGACGGCAC CGCCAAGGGC GGCGTCATCT TCGCCCTGGC CAAGCAGTTT
GGCCTGCCGA TTCGCTACAT CGGCGTGGGC GAGGGCATCG ATGACCTGCG TCCGTTCGAG
GCGCAGGCCT TCGTCCAGGC ACTCTTCGAG GAGCGCGAGC GCGGATGA
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| Protein sequence | MFGSNDDKKS PADVGAQNPP VTEEKKSLFG WLRKKPAEPA APAEAPASEP QVVPAPEVES
DANQAPLPAA APEEPVAAVP VERHEPSAPA APGVETPTAA VADAEPVQPL QPAQPPEAEG
KSGFFSRLLG GDNAPVPAAA PPAETPAPVA PSEAAPPAAL PATQDKPSFF ARLKQGLSKT
SASLGEGMAS LFLGKKAIDD DLLDDLETRL LTADVGVEAT TTIIGNLTKR VARKELADSG
ALYKALQEEL VTLLKPVEQP LVIDSAKQPY VILVVGVNGV GKTTTIGKLA KKLQLDGKKV
MLAAGDTFRA AAVEQLQVWG ERNNIAVIAQ HTGADSASVI FDAVQAAKSR GIDVLIADTA
GRLHTKDNLM EELKKVRRVI GKLDETAPHE VLLVLDAGTG QNAISQAKQF DQTVNLTGLA
LTKLDGTAKG GVIFALAKQF GLPIRYIGVG EGIDDLRPFE AQAFVQALFE ERERG
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