| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4170 |
|---|
| Symbol | mtgA |
|---|
| ID | 5105689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4573361 |
|---|
| End bp | 4574089 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640505434 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_001189649 |
|---|
| Protein GI | 146309184 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0729077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTT CCCTGACCCG CCGCCTGCTG AAACTCCTGT TCTGGCTGAT GCTCGCCAGC
GCACTGCTGG TGCTCGCCCT GCGCTGGCTG CCGCCACCCG GCACGGCGCT GATGCTCGAG
CGCAAGATCG AGTCCTGGGG CAGCGAGCAA CCGTTGCAGC TGAAACGTCA GTGGCGCCCC
TGGAACGAGT TGCCGGACCA TCTGAAGATG GCGGTAATCG CCGCCGAAGA CCAGAAGTTC
GCCGAGCACT GGGGCTTCGA CGTCGGCGCC ATCCAGGCGG CGCTGGCACA TAATCAGAGC
GGCGGCTCGC TGCGCGGCGC CAGCACCCTG AGCCAGCAGG TGGCCAAGAA CCTGTTCCTC
TGGTCCGGCC GCAGCTGGCC GCGCAAGGCG CTGGAGGCCT GGTTCACCGC GCTGATCGAG
CTGTTCTGGC CCAAGGAGCG GATTCTCGAG GTCTACCTCA ACAGCGTGGA ATGGGGCGAC
GGCATCTTTG GTGCCGAAGC GGCCGCACAG CATCATTTCG GCGTCGGCGC GCCCTACCTG
AACCGCCAGC AGGCCAGCCA GCTCGCCGCC GTCCTGCCCA ACCCGCGGCG CTGGAGCGCC
GGCCGCCCGG ATGCCTACGT CAATCGCCGC GCCGCCTGGA TTCGCCAGCA GATGACGCAG
CTCGGCGGCA GTCACTACCT CAACCAGCTC AAACCCAGGT ACCCGGAATG GTGGCCGCGC
TGGCTGTAG
|
|---|
| Protein sequence | MLRSLTRRLL KLLFWLMLAS ALLVLALRWL PPPGTALMLE RKIESWGSEQ PLQLKRQWRP
WNELPDHLKM AVIAAEDQKF AEHWGFDVGA IQAALAHNQS GGSLRGASTL SQQVAKNLFL
WSGRSWPRKA LEAWFTALIE LFWPKERILE VYLNSVEWGD GIFGAEAAAQ HHFGVGAPYL
NRQQASQLAA VLPNPRRWSA GRPDAYVNRR AAWIRQQMTQ LGGSHYLNQL KPRYPEWWPR
WL
|
|---|
| |