| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4166 |
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| Symbol | trmB |
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| ID | 5105685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4570844 |
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| End bp | 4571560 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505430 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001189645 |
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| Protein GI | 146309180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.533866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCCAACAGCC CGAACTGACC GAAGACGGCC GCCAGCGCCG CACCATCAAG
AGCTTCGTGA TGCGTGCCGG ACGCATGACC GAGGGCCAGC AGCGTGGCCT GGACAAGGGC
TGGCCGCTGT TCGGCCTGGA GCTGGAAGAC GGCCTGCGCG ACTTCGACCA GGTATTCGGG
CGCAGCGCGC CGCGCACCTT CGAGATCGGC TTCGGCATGG GCCATTCCAC CCTGGAGATG
GCCGCTGCCG CGCCCGAGCA GGACTTCATC GGTGTCGAGG TGCACAAGCC CGGTGTCGGC
GCGCTGCTCA ATGGCGTGAT GGCGCACAAC CTGAGCAACG TGCGTGTCTA CAGCTGCGAC
GCCCTGGAAG TGCTGCAGGG TTGCGTGGCC GATGCCAGCC TCGATCGCGT GCTGCTGTTC
TTCCCCGATC CCTGGCACAA GTCGCGTCAT CACAAGCGCC GCATCGTCCA GCCGGCCTTC
GCCGAGCTGG TGCGCCGCAA GCTGAAGATC GGCGGCGTGC TGCACATGGC CACCGACTGG
GAGAACTACG CCGAGCACAT GCTCGAGGTG ATGAACGCTG CACCGGGCTA CCGCAACCTG
GCTGCCGACG GCACCTACGT GCCGCGCCCC GAGGAGCGTC CGGTGACCAA GTTCGAGCGC
CGTGGCGAAC GCCTCGGTCA CGGCGTATGG GACCTGAAGT TCCAGCGCCA GGAGTGA
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| Protein sequence | MTDTQQPELT EDGRQRRTIK SFVMRAGRMT EGQQRGLDKG WPLFGLELED GLRDFDQVFG
RSAPRTFEIG FGMGHSTLEM AAAAPEQDFI GVEVHKPGVG ALLNGVMAHN LSNVRVYSCD
ALEVLQGCVA DASLDRVLLF FPDPWHKSRH HKRRIVQPAF AELVRRKLKI GGVLHMATDW
ENYAEHMLEV MNAAPGYRNL AADGTYVPRP EERPVTKFER RGERLGHGVW DLKFQRQE
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