Gene Pmen_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4156 
Symbol 
ID5105675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4559940 
End bp4560560 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID640505420 
Productmethionine biosynthesis protein MetW 
Protein accessionYP_001189635 
Protein GI146309170 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02081] methionine biosynthesis protein MetW 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGG ATCTGGACAT CATCCAGGAA TGGATCGCCC CGGGCAGCCG TGTGCTCGAC 
CTGGGCTGCG GCGACGGCGA GCTGCTCGCC TGGCTGCGCG ACAACAAGCA GGTTTCCGGC
TACGGCCTGG AAATCGACCC GGACAAGATC GCCCTGTGCA TCGAGCGCGG CGTCAACGTC
ATCGAGCAGA ACCTCGACCT GGGCCTGGGC AACTTCGCCA GCAACAGTTT CGACGTGGTG
GTCATGACCC AGTCGCTGCA GGCGCTGCAC TACCCGGACA AGGTGCTGGC CGAGATGCTG
CGGGTCGGCA AGACCTGCAT CATCACCTTC CCCAACTTCG GCCACTGGCG CTGCCGCTGG
TACCTGACCA CCAAGGGTCG CATGCCGGTG TCGGACTTCC TGCCCTACAC CTGGTACAAC
ACGCCGAACA TCCACTTCTG CACCTTCGAG GACTTCGAGC GCCTGTGCCA CGCCCAGGGC
GCGCGGATCG AGGAGCGCCT GGCGGTGGAC CGCGATCACC GCCATGGCTG GGCCAGCCGC
GCCTGGCCTA ATCTATTGGG TGAGATCGGC ATCTATCGCA TCAGCGGAGC GGATCTCGCA
GCCCACCGCG TCGCGGTCTG A
 
Protein sequence
MRADLDIIQE WIAPGSRVLD LGCGDGELLA WLRDNKQVSG YGLEIDPDKI ALCIERGVNV 
IEQNLDLGLG NFASNSFDVV VMTQSLQALH YPDKVLAEML RVGKTCIITF PNFGHWRCRW
YLTTKGRMPV SDFLPYTWYN TPNIHFCTFE DFERLCHAQG ARIEERLAVD RDHRHGWASR
AWPNLLGEIG IYRISGADLA AHRVAV