| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4154 |
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| Symbol | |
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| ID | 5105673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4556684 |
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| End bp | 4558666 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505418 |
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| Product | GTPase (dynamin-related)-like protein |
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| Protein accession | YP_001189633 |
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| Protein GI | 146309168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0699] Predicted GTPases (dynamin-related) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.67903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGG AACGTCTCAG CCAGCAAGTG GACGCCTACG TCGCCTGGAA GCGCGAGCTG
ATGCGCGAGA TCACCCGCTA CCGCAGCTGG CTGGAGCACA ACCGGCTCAA CTCCGAAGCG
GTGCAGGCCA AGCTCGAGCG CGCGCTGAAG ATCCTGCGCA CCGACCACAT CACCCTGGCC
TTCGTCGGCG AGTTCTCCCG AGGCAAGACC GAGCTGATCA ACAGCCTGTT CTTCTCCGAG
TACGGCCAGC GCATGTTGCC GTCGCACGCC GGGCGCACCA CCATGTGCCC CACCGAGCTG
TTCTTCGACC CGCGCTCGGA GCGCTCCTAC ATCCGCCTGT TGCCCATCGA GACGCGCACC
GCCTCGGCCA GCGTCGCCCA GTTCAAGCGC ATTCCCCGGC ACTGGGTGAA CATTCCCCTG
GACACCAGCG ACCCGGCCAA CATGGCCCTG GCCTTCAGCC AGGTGGCCAA GACCAAGCCC
ATGCCGGTGG AGCAGGCGAT TCAGCTCGGC TTCCACCCGG ACATGCTCGA AGGCACCGGC
AAGCGTGGCC AGGTGCTGGT GCCGGCCTGG CGTCACGCCA TGGTCAACTT CGATCACCCG
CTGCTGCGTC AGGGTCTGCG CATTCTCGAC ACGCCCGGCC TCAACGCGCT GGGCAGCGAG
CCGGAGCTGA CCCTGTCGAT GCTGCCCAAT GCCCAGGCGA TCATCTTCCT GCTGGCCGCC
GATACCGGCG TCACCGCCAG CGACATGAGC ATCTGGCAGC AGCACATCCG CCAGCTCGAC
GAAGACACCC AGACCAGCCT GTTCGCGGTA CTGAACAAGA TCGACGTGCT GTGGGACGAC
CTGGCCGGCG AGACCTTCGT GCAGAACGCC ATCGGCCAGA TCCAGAGCGC CACCGCCAAG
CAGTTGGGTA TCGCCAAGCA GGACGTGCTG CCGCTGTCGG CCAAGCAGGC CTTGCTGGCC
AAGGTGCGCA AGGACGAGGA GCTGCTGGCC CGCAGTCAGA TGGCCAACCT GGAAACCCTG
CTGTGCGACC GCATCGTCAC CCAGAAGGAG CGCCTGATCG AAGATCAGGT GGTGCGCCAG
GTCCTGGCCC TGCTCAACAA CAGCCAGCAT GTGCTGGGCC TGCGCCTGGA GAAGGTCAGC
GAACAGCTCA CCCTGCTCGG CAACCACCAG CAGGACAACG GCCAGCTGCT GTTCGAACTG
ACCGCCAAGA CCAAGGAAGA CCACAGCCGA CATCACAAAC GCCTGCTCGG CCTGAAGACC
AACCAGCGCC TGCTGCAGCG CCAGGGCCAG CTGCTGCGCC ATGCCGCACG CCCCGAGCGT
CTGGACGAGC ACCTGGCCAA TGTACGGCGC AATCTCACCG GCAGCTGGAC CACTCTTGGC
ATCAATCAGG CCATCCTGCA CTTCTTCCGC GCCGTGGAGC ACGACCTGCA CAGCCTCGAG
CATGAAGCCG AGATGGCCAA CCGCATGGTC GCCGCCATCT ACCGCCGACA TAACGAAGAC
AACCCGCTGG GTGGCATCGA CGCGCCGCAG TTCAAGATCC AGCGCTACCA GCGCGAGCTG
AAGAAACTGC AGGTCAAGGG CGACCAGTTC CGCCTGCACG TGAAAACCCT GCTCACCGAA
CAGCGCAGCC TGACCCGGCG CTTCTTCGCC ACCCTGGCCC AGGAAGTGAT CGGCCTGCAC
CGGCGCCTGC GCCAGGATGC CGAGCAATGG GCCGCGGATG CGCTGATGCC GCTGATGCAG
CACACCCTGG AACACAAGCA GATGCTGGAA AGCCACATGC TGCGCCTCAA GGCCCTGGCC
CAGGAGACCC AGCAGACACG CAAGCGCAGC CAGCAACTGG CGCGCTACAA GGAAGAGCTG
GAACTGCAGC TGGCCCAGGC CGCCGACATG CTGCGCATCC TGCGCCGGCC GGCGCCGGTA
CAGCGCCAAG GCAAGGTGGT CAGTCTGCCC TCGGCGATCG GCGCCCAGGT CGGCGGCGAA
TAG
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| Protein sequence | MSMERLSQQV DAYVAWKREL MREITRYRSW LEHNRLNSEA VQAKLERALK ILRTDHITLA
FVGEFSRGKT ELINSLFFSE YGQRMLPSHA GRTTMCPTEL FFDPRSERSY IRLLPIETRT
ASASVAQFKR IPRHWVNIPL DTSDPANMAL AFSQVAKTKP MPVEQAIQLG FHPDMLEGTG
KRGQVLVPAW RHAMVNFDHP LLRQGLRILD TPGLNALGSE PELTLSMLPN AQAIIFLLAA
DTGVTASDMS IWQQHIRQLD EDTQTSLFAV LNKIDVLWDD LAGETFVQNA IGQIQSATAK
QLGIAKQDVL PLSAKQALLA KVRKDEELLA RSQMANLETL LCDRIVTQKE RLIEDQVVRQ
VLALLNNSQH VLGLRLEKVS EQLTLLGNHQ QDNGQLLFEL TAKTKEDHSR HHKRLLGLKT
NQRLLQRQGQ LLRHAARPER LDEHLANVRR NLTGSWTTLG INQAILHFFR AVEHDLHSLE
HEAEMANRMV AAIYRRHNED NPLGGIDAPQ FKIQRYQREL KKLQVKGDQF RLHVKTLLTE
QRSLTRRFFA TLAQEVIGLH RRLRQDAEQW AADALMPLMQ HTLEHKQMLE SHMLRLKALA
QETQQTRKRS QQLARYKEEL ELQLAQAADM LRILRRPAPV QRQGKVVSLP SAIGAQVGGE
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