| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4139 |
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| Symbol | |
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| ID | 5105658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4541506 |
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| End bp | 4542960 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505403 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_001189618 |
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| Protein GI | 146309153 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA TCGTCAAAGT TTTCCCGGAA ATCACCATCA AGAGTCGCCC GGTGCGCAAG
CAGTTCATCC GCCAGTTGGG GAAGAACATC CGCGCCGTGC TGCGCGATCT CGACCCTGAG
CTGCGGGTCA CCGGTGTCTG GGACAACCTC GAGGTGGAAA CCGACCTGGA CGATCCCAAG
CTGCTCGCCG AGATGACCGA GCGCCTACGC AACACCCCGG GCATCGGTCT GTTCCTCGAG
GTCAACGAAT ATCCGCTGGG CGATCTGGAT GCGATCACCG AGCACTGCAA GCGCCATTAC
GCCGATCAGC TGCCGGGCAA GATCTTCGCC GTACGCTGCA AGCGCGGCGG CAAGCATCCC
TTCAGCTCCA TCGACGTCGA GCGCCATGTC GGCTCGCGCC TGCGCCAGGA GTGCAATGCC
GCCGGCATCG ATCTGAAGAA GCCGGAAGTC GAAGTGCGCA TGGAGATCCG CGATCAGCGC
CTGTTCGTGG TGCACAACCG CCACGAAGGC CTGGGCGGCT ACCCGCTCGG TTCGCTGGAG
CAGACCCTGG TGCTGATGAG CGGCGGCTTC GACTCCACCG TGGCGGCCTA TCAGATGATG
CGCCGCGGCC TGGTCAGCCA CTTCTGCTTC TTCAATCTCG GTGGTCGTGC CCATGAACTG
GGCGTAATGG AAGTGGCGCA CTATATCTGG CAGAAGTTCG GCCGCTCGCA GCGCGTGCTG
TTCATCAGCG TACCGTTCGA GGAAGTGGTC GGCGAGATTC TCGGCAAGGT CGACAACAGC
CAGATGGGCG TGATCCTCAA GCGCATGATG CTGCGCGCCG CCACCCGGGT GGCCGAACGC
CTGGAGATCG AGGCGCTGGT CACCGGCGAG GCGATCAGCC AGGTGTCCAG CCAGACCCTG
ACCAACCTGG CGGTGATCGA CTCGGCCACC GACATGCTGG TGATGCGGCC GCTGATCGCC
AGCCACAAGC AGGACATCAT CGACACCGCC ACGCAGATCG GCACCGCCGA GTTCGCCAAG
AACATGCCCG AGTACTGCGG CGTGATCTCG GTCAACCCGA CCACCAAGGC GCGCGGCTAT
CGCATCGAGC GCGAGGAAGC GCAGTTCGAC ATGGCCATCC TCGAGCGCGC CCTGGAGCGC
GCCACCCAGC TGCCCATCGA TCGGGTGATC GACGAGCTGG GCAAGGACGT GCAGGTCGAG
GAAGTGCGCG AGGCCCTGGC CGGGCAGATC GTCATCGACA TCCGTCACCC CGATGCCGCC
GAAGACGAGC CGCTGGACGT GCCGGGTGTC GAGGTGCAGA CGCTGCCGTT CTACGCGCTG
AACAACAAAT TCAAGGAACT GGATGAGAAC CGCCAGTACC TGCTGTATTG CGACAAGGGC
GTCATGAGTC GCCTGCATGC CCATCACCTG CTGAGCGAGG GGCATGCCAA TGTGCGCGTT
TATCGTCCGG CATAG
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| Protein sequence | MKLIVKVFPE ITIKSRPVRK QFIRQLGKNI RAVLRDLDPE LRVTGVWDNL EVETDLDDPK
LLAEMTERLR NTPGIGLFLE VNEYPLGDLD AITEHCKRHY ADQLPGKIFA VRCKRGGKHP
FSSIDVERHV GSRLRQECNA AGIDLKKPEV EVRMEIRDQR LFVVHNRHEG LGGYPLGSLE
QTLVLMSGGF DSTVAAYQMM RRGLVSHFCF FNLGGRAHEL GVMEVAHYIW QKFGRSQRVL
FISVPFEEVV GEILGKVDNS QMGVILKRMM LRAATRVAER LEIEALVTGE AISQVSSQTL
TNLAVIDSAT DMLVMRPLIA SHKQDIIDTA TQIGTAEFAK NMPEYCGVIS VNPTTKARGY
RIEREEAQFD MAILERALER ATQLPIDRVI DELGKDVQVE EVREALAGQI VIDIRHPDAA
EDEPLDVPGV EVQTLPFYAL NNKFKELDEN RQYLLYCDKG VMSRLHAHHL LSEGHANVRV
YRPA
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