Gene Pmen_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4123 
Symbol 
ID5105642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4520752 
End bp4521264 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID640505387 
Producthypothetical protein 
Protein accessionYP_001189602 
Protein GI146309137 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATACG CCCTGTTTCT GCTGGCCGCC GCCGTCAGCC CGCCGACCAT GGCCAATCAG 
CAACCCGATC TCTACGGCCG CTACGAGCTG ATCAAACTGC CCGCCCTGGG CCAGACCCTC
AAGGCCAAGA TGGACACCGG CGCGATGACC GCGTCCCTGT CGGCCAAAGA TATCGAGCCG
TTCAAGCGCG ACGGCGAGGA CTGGGTACGC TTTCGCCTGG CGGTGGAGGG GGCCGACGAC
ACCCTTTACG AACACCCCCT GATCCGCATC GCCGAGATCA AGAAACGCAG CGAGGAGTCT
GACGAGCCGG CCCCGGCCGA GGTGGCCTAT TCGCAGCGTC CGGTGATCGA GATGCCGATC
TGCCTGGGCG ACGAGAAACG CATCATCGAA GTCAATCTCA CCGACCGCAG CACCTTCCGC
TACCCTCTAC TGATCGGTGC CAGTGCCATG CGCGATCTTG GTGCGGCAGT GGATCCGGCG
GAGCGCTACA CCCGCGACCG TCCACAATGC TGA
 
Protein sequence
MKYALFLLAA AVSPPTMANQ QPDLYGRYEL IKLPALGQTL KAKMDTGAMT ASLSAKDIEP 
FKRDGEDWVR FRLAVEGADD TLYEHPLIRI AEIKKRSEES DEPAPAEVAY SQRPVIEMPI
CLGDEKRIIE VNLTDRSTFR YPLLIGASAM RDLGAAVDPA ERYTRDRPQC