Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4123 |
Symbol | |
ID | 5105642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4520752 |
End bp | 4521264 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505387 |
Product | hypothetical protein |
Protein accession | YP_001189602 |
Protein GI | 146309137 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATACG CCCTGTTTCT GCTGGCCGCC GCCGTCAGCC CGCCGACCAT GGCCAATCAG CAACCCGATC TCTACGGCCG CTACGAGCTG ATCAAACTGC CCGCCCTGGG CCAGACCCTC AAGGCCAAGA TGGACACCGG CGCGATGACC GCGTCCCTGT CGGCCAAAGA TATCGAGCCG TTCAAGCGCG ACGGCGAGGA CTGGGTACGC TTTCGCCTGG CGGTGGAGGG GGCCGACGAC ACCCTTTACG AACACCCCCT GATCCGCATC GCCGAGATCA AGAAACGCAG CGAGGAGTCT GACGAGCCGG CCCCGGCCGA GGTGGCCTAT TCGCAGCGTC CGGTGATCGA GATGCCGATC TGCCTGGGCG ACGAGAAACG CATCATCGAA GTCAATCTCA CCGACCGCAG CACCTTCCGC TACCCTCTAC TGATCGGTGC CAGTGCCATG CGCGATCTTG GTGCGGCAGT GGATCCGGCG GAGCGCTACA CCCGCGACCG TCCACAATGC TGA
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Protein sequence | MKYALFLLAA AVSPPTMANQ QPDLYGRYEL IKLPALGQTL KAKMDTGAMT ASLSAKDIEP FKRDGEDWVR FRLAVEGADD TLYEHPLIRI AEIKKRSEES DEPAPAEVAY SQRPVIEMPI CLGDEKRIIE VNLTDRSTFR YPLLIGASAM RDLGAAVDPA ERYTRDRPQC
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