| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4099 |
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| Symbol | |
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| ID | 5105618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4490321 |
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| End bp | 4491628 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505363 |
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| Product | peptidase U32 |
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| Protein accession | YP_001189578 |
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| Protein GI | 146309113 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTT TTCCCGAACT GTTGTCGCCA GCCGGCACCC TGAAGAACAT GCGCTACGCC
TTCGCCTATG GCGCCGATGC GGTGTATGCC GGGCAGCCGC GTTACAGTCT GCGCGTGCGC
AACAACGAGT TCGACCACGC CAACCTCGCC CTCGGCATCG ATGAGGCGCA CGCGCAGGGC
AAGCAGTTCT ACGTGGTGGT CAACATCGCC CCGCACAACG CCAAGCTCAG GACCTTCCTC
AAGGACCTGG CGCCGGTGAT CGAGATGTGT CCCGATGCCC TGATCATGTC CGACCCCGGC
TTGATCATGC TGGTGCGCGA GCACTACCCG CAGATGCCGA TCCACCTGTC GGTGCAGGCC
AATGCGGTGA ACTGGGCCAG CGTGCGGTTC TGGCAGCAGC AGGGGCTGAG CCGGGTGATC
CTGTCGCGCG AGCTGTCGCT GGAGGAAATC GAGGAGATCC GCAGCGAGGT GCCGGGCATG
GAGCTGGAAG TGTTCGTCCA TGGCGCCCTG TGCATGGCCT ATTCCGGGCG TTGCCTGCTG
TCGGGCTACA TCAATCGCCG CGATCCCAAC CAGGGCACCT GCACCAACGC TTGCCGCTGG
CAGTACCAGG CCACGCCTGC GAGCGAGAAC GAACTGGGCG AGATCGTTCG TGTGGTCGAG
CCGACCCTGG GCCAGGGCGC GCCGACCACC CAGGCATTCG TGCTGCAGGA AGCAGGGCGG
CCGGACGATG AAATGACCGC CTTCGAAGAC GAGCACGGCA CCTACATCAT GAACTCCAAG
GACCTGCGCG CGGTGCAGCA CGTCGAGCGC CTGGTGCGCA TGGGCGTGCA TTCGCTGAAG
ATCGAAGGGC GCACCAAGAG CCATTTCTAC GTGGCGCGCA CCGCGCAGGT CTACCGCCGC
GCCATCGACG ATGCGCTGGC CGGCAAGCCG TTCGACCCGA GCCTGCTGGG CAGCCTGGAG
TCACTGGCGC ATCGGGGTTA CACCGAGGGC TTCCTGCGCC GCCATGTACA TGACGAATAC
CAGAACTACC AGCGCGGCAG CTCGCTGTCG GAGCGTCAGC AGTTCGTCGG TGAGCTGACC
GGCGAGCGCC GCGGCGAGCT GGCCGAGGTG CGGGTGAAGA ACTGCTTCGC TGTCGGTGAC
GGGCTGGAGC TGATGACGCC GCAGGGCAAT CTGCGTTTCA GCCTGGAGCA CCTGCAGAAT
GCACAGGGGC AGGCGCAGTC GGTGGCGCCT GGCGATGGCC ACGTTCTGTA TCTGCCGTTG
CCGGCAGATG TGCAGCTGGA ATACGGCCTG CTGATGCGCG ACCTATAG
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| Protein sequence | MPRFPELLSP AGTLKNMRYA FAYGADAVYA GQPRYSLRVR NNEFDHANLA LGIDEAHAQG
KQFYVVVNIA PHNAKLRTFL KDLAPVIEMC PDALIMSDPG LIMLVREHYP QMPIHLSVQA
NAVNWASVRF WQQQGLSRVI LSRELSLEEI EEIRSEVPGM ELEVFVHGAL CMAYSGRCLL
SGYINRRDPN QGTCTNACRW QYQATPASEN ELGEIVRVVE PTLGQGAPTT QAFVLQEAGR
PDDEMTAFED EHGTYIMNSK DLRAVQHVER LVRMGVHSLK IEGRTKSHFY VARTAQVYRR
AIDDALAGKP FDPSLLGSLE SLAHRGYTEG FLRRHVHDEY QNYQRGSSLS ERQQFVGELT
GERRGELAEV RVKNCFAVGD GLELMTPQGN LRFSLEHLQN AQGQAQSVAP GDGHVLYLPL
PADVQLEYGL LMRDL
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