| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4097 |
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| Symbol | |
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| ID | 5105616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4487560 |
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| End bp | 4489491 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505361 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001189576 |
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| Protein GI | 146309111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CCGATGCCAT GGCCGATGCG GGCAAGACCG CGGTGCTGCA GAACATTCAC
GGCACCATGG AGTTCCTGCA GAAGTTTCCC CCCTTCAACC AGATGGACAC CGCCCATCTG
GCGTTTCTGG TCGAGCATTG CCAGCTGCGC TTCTACGCCG AAGGCGACTC GATCATCAAG
CCGAGCGACG GCCCGGTCGA ACACTTCTAC ATCGTCAAAC AGGGTCGCGT GCACGGCGAG
CGCCCGCACA GCGCGCGGCG CGGCACCGAA ACCACCTTCG AGATCACCGT TGGCGAGTGC
TTCCCGCTGG CCGCGCTGAT TGGCGAACGC GCCACCCGCA CCGAACACCT GGCCGCCGAA
GACACCTTCT GCCTGCTGCT GACCAAGCTC GCCTTCGTCA AGCTGTTCGC CGTGTCCAAC
CCGCTGCGCG ACTTCGCCCT GCGCGGGGTC AGCAGCCTGC TCGATCAGGT CAACCAGCAG
GTGCAGCTGC GTGCGGTGGA AACCCTCGGC GCGCAATACT CGCTGGACAC CCGCCTGGGC
GAACTGGCCA TGCGTCAGCC CATCGGCTGC GCCCCGCAGA CTCCGCTGCG CGAGGCCGTG
CGGCTGATGC ACGAGCAGCA CGTGGGCAGC ATCGTGGTGG TCGATCCGGA CAATCGCCCA
TTGGGCATCT TCACCCTGCG CGACCTGCGC CGCGTGGTCG CCGACGGCGC CGACCTGGCG
CAGCCGATCA GCAACCTGAT GACCCCCAGG CCCTTCCACC TGCCCCCGGA CGCCAGCGCC
TTCGACGCCG CCATCGCCAT GACCGAGCGG CATATCGCCC ACGTCTGCCT GGTGGACCAC
GAGAAGCTCT GCGGGGTGAT CTCCGAGCGC GACCTGTTCA GCCTGCAGCG CGTCGACCTG
GTGCACCTGG CGCGCACCAT TCGCCATGCC GGCAAGGTGG AGACCCTGGC CGGGCTGCGC
AGCGACATCC GCCTGCTGGT CGACCGCATG CTGGCCCACG GCGCCAGCTC GACGCAGATC
ACCCATATCG TCACCCTGCT CAATGACCAC ACGGTCAGCC GGGTGATCGA GTTGACCATC
GAGGAGATGG GCGACCCCGG GGTGCCCTTC ACCTGGCTGT GCTTCGGCAG CGAGGGCCGC
CGCGAGCAGA CCCTGCATAC CGATCAGGAC AACGGCATTC TCTTCGAGGC CGCCGATGCT
GCCGAGGCCG CCGCCATTCG CGGGCGCCTG CTGCCGCTGG CCGCCGAGAT CAACCAGCGC
CTGGCGCAGT GCGGCTTTAC CCTGTGCAAG GGCAACATCA TGGCCAGCAA CCCCGAGCTG
TGCCTGTCGC GCCAGGAATG GTCGCGGCGC TTCGCCGGCT TCGTGCTCGA GGCCACGCCG
GAGAACCTGC TGGGCTCCAC CATCTACTTC GATCTGCGCG CGATCTGGGG CCCGGACGAA
GGTTGCGAGC AGCTGCGCGA GGAACTGCTC GGGCGCATCG GCAACAACAG CCTGTTCCAG
CACATGATGG CCGAGAACGC CCTGCGCCAT CGCCCGCCGG TGGGACGTTT CCGCGACTTC
GTGGTGGCGC GCTCGGGCGC CGACAAGGAC ACCCTGGACC TCAAGGTGCA GGGCCTGACC
CCCTTCGTCG ATGGCGCCCG CCTGCTGGCC CTGGCCAATC ACATCTCTGC GGTGGGCACG
CTGGAACGCC TGCGCGCCCT GGTCGCCAAG GGCGTGATCG AAGCCCAGGA CGGCGCGGCC
TACGAAGAGG CCTACCACTT CATCCAGCAG ACCCGCATGC AGCAGCACCA ATTGCAGGCA
CGCGACGAGC AGCCCTACTC CAATCGTCTC GATCCTGACA GTCTGAACCT GCTGGATCGG
CGCATCCTTC GCGAATCCTT CCGCCAGGCC CAGCGACTGC AGAGCAGCCT GGCCGTGAGG
TATCAGCTAT GA
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| Protein sequence | MSKADAMADA GKTAVLQNIH GTMEFLQKFP PFNQMDTAHL AFLVEHCQLR FYAEGDSIIK
PSDGPVEHFY IVKQGRVHGE RPHSARRGTE TTFEITVGEC FPLAALIGER ATRTEHLAAE
DTFCLLLTKL AFVKLFAVSN PLRDFALRGV SSLLDQVNQQ VQLRAVETLG AQYSLDTRLG
ELAMRQPIGC APQTPLREAV RLMHEQHVGS IVVVDPDNRP LGIFTLRDLR RVVADGADLA
QPISNLMTPR PFHLPPDASA FDAAIAMTER HIAHVCLVDH EKLCGVISER DLFSLQRVDL
VHLARTIRHA GKVETLAGLR SDIRLLVDRM LAHGASSTQI THIVTLLNDH TVSRVIELTI
EEMGDPGVPF TWLCFGSEGR REQTLHTDQD NGILFEAADA AEAAAIRGRL LPLAAEINQR
LAQCGFTLCK GNIMASNPEL CLSRQEWSRR FAGFVLEATP ENLLGSTIYF DLRAIWGPDE
GCEQLREELL GRIGNNSLFQ HMMAENALRH RPPVGRFRDF VVARSGADKD TLDLKVQGLT
PFVDGARLLA LANHISAVGT LERLRALVAK GVIEAQDGAA YEEAYHFIQQ TRMQQHQLQA
RDEQPYSNRL DPDSLNLLDR RILRESFRQA QRLQSSLAVR YQL
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