| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4085 |
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| Symbol | |
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| ID | 5106382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4475277 |
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| End bp | 4476080 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505349 |
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| Product | biotin biosynthesis protein BioC |
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| Protein accession | YP_001189564 |
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| Protein GI | 146309099 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT ACGCCCAGCC CGGCGGCCTG CCGGACAAGC GCCAGGTCGC CGCCTCCTTT
TCCCGCGCGG CCGAAAGCTA CGACGCCGTG GCCGAGCTGC AGCGCAGCGT CGGCGTGCAG
CTGTTGGCGC GTCTGCCCGC ATCGCTGCAG CCACAGCGCT GGCTGGATCT GGGCTGCGGC
ACCGGATTTT TCACCCGCGC CCTGGCCGAG CGCTACCCGT CAGGCGAGGG CGTGGCGGTG
GATATCGCCG AGGGCATGCT GCGTCATGCC CGGCCGCTTG GCGGTGCGAC GCATTTCATC
GCCGGCGATG CTGAGGCGCT GCCACTGCAA TGCACCAGCG CCGATCTGCT GTTCTCCAGC
CTGGCCCTGC AGTGGTGCGG AGATTTTCAG CGGGTGCTGA GCGAGGCCCG GCGCGTGCTG
CGTCCCGGTG GTGTGATGGC CTTTTCCAGC CTGTGCGTCG GCACCCTGCA GGAGCTGCGC
GACAGCTGGC AGGCGGTCGA TGGCTTCGTC CACGTCAATC GCTTTCGCCG GTTCGAGGAC
TATCAGCAGC TCTGCGCAGG CAGCGAGATG CAGGTGCTGG CGCTGCAGCG CCGGGCCGAA
ACCCTGCATT TTGCCGATTT GCGCAGCCTG ACCAGTTCGC TCAAGGACCT CGGCGCGCAC
AACCTCAATC CCGGCCGCCC GGTCGGGCTG ACCGGGCGCG CGCGGATTCG CGCGCTGATC
GAGGCCTACG AGACGTTCCG CCAGCCAGCC GGGCTGCCCG CCACGTACCA GGTGGTCTAC
GGCGTGCTGG GCAAACCCCG CTAG
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| Protein sequence | MSEYAQPGGL PDKRQVAASF SRAAESYDAV AELQRSVGVQ LLARLPASLQ PQRWLDLGCG
TGFFTRALAE RYPSGEGVAV DIAEGMLRHA RPLGGATHFI AGDAEALPLQ CTSADLLFSS
LALQWCGDFQ RVLSEARRVL RPGGVMAFSS LCVGTLQELR DSWQAVDGFV HVNRFRRFED
YQQLCAGSEM QVLALQRRAE TLHFADLRSL TSSLKDLGAH NLNPGRPVGL TGRARIRALI
EAYETFRQPA GLPATYQVVY GVLGKPR
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