Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4082 |
Symbol | |
ID | 5106379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4472984 |
End bp | 4473718 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640505346 |
Product | hypothetical protein |
Protein accession | YP_001189561 |
Protein GI | 146309096 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATCG GCAACAGCCT GCCGTCGTTC GCACCTGCGC CCTCCGCTGC GCCGGCCCGC CCGCTTTCGT CCGATGTCTC CCCCGATATG CTCCGTGCCG ATCTCCCGCC GGTGGCCGCT GCTCAGGAAC AGCAGGCGGA TTCGGCCGCC TCGGAACGCG AGGAGGCCGA TCGTCCTGCC ACCGAAGGGC GTGCCGGCGA CAGCGAGCCC AGCCCGCAGG AGCAGCGTCT CGAGCAGCTG GAAATCGCCG AACTGGCGCA ACGCGACCGC GAGGTCCGCG CTCACGAGCA GGCGCATGCG GCGGTGGGCG GTCAGTACGC CGGAGCTCCC ACCTACAGTT TCAAGCGCGG GCCCGATGGC CAGCGTTATG CCGTGTCCGG CGAAGTCAGC ATCGATACCG CGCCCGTTCC CAACGACCCT GAAGCCACCT TGCGCAAGAT GGAGATCGTC CTGCGCGCGG CGCTGGCCCC GGTTGAACCC TCTGCGCAGG ACCTGCGCGT GGCTGCGCTG GCTCAGGCGC AGGCCGCCCA GGCACGCGTC GAGCTGGCCG AGCTGCGTCG TGAGGAAGCC GCGGCGGCGG AGCAGGCGCG CGACGAACGC GCACGGTCCC GGCGCGACGA ACAGGAACAG ACGAGCCAGC AGCGGCAAGC CCCGCCGTCT GCGCCTAGTC TTGATCTGTA TCGGCGCCTG GGTGAATTGC CGGCGCCTGA GCCGCGTGTC GATCTGGTCG CGTAG
|
Protein sequence | MLIGNSLPSF APAPSAAPAR PLSSDVSPDM LRADLPPVAA AQEQQADSAA SEREEADRPA TEGRAGDSEP SPQEQRLEQL EIAELAQRDR EVRAHEQAHA AVGGQYAGAP TYSFKRGPDG QRYAVSGEVS IDTAPVPNDP EATLRKMEIV LRAALAPVEP SAQDLRVAAL AQAQAAQARV ELAELRREEA AAAEQARDER ARSRRDEQEQ TSQQRQAPPS APSLDLYRRL GELPAPEPRV DLVA
|
| |