Gene Pmen_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4082 
Symbol 
ID5106379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4472984 
End bp4473718 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID640505346 
Producthypothetical protein 
Protein accessionYP_001189561 
Protein GI146309096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG GCAACAGCCT GCCGTCGTTC GCACCTGCGC CCTCCGCTGC GCCGGCCCGC 
CCGCTTTCGT CCGATGTCTC CCCCGATATG CTCCGTGCCG ATCTCCCGCC GGTGGCCGCT
GCTCAGGAAC AGCAGGCGGA TTCGGCCGCC TCGGAACGCG AGGAGGCCGA TCGTCCTGCC
ACCGAAGGGC GTGCCGGCGA CAGCGAGCCC AGCCCGCAGG AGCAGCGTCT CGAGCAGCTG
GAAATCGCCG AACTGGCGCA ACGCGACCGC GAGGTCCGCG CTCACGAGCA GGCGCATGCG
GCGGTGGGCG GTCAGTACGC CGGAGCTCCC ACCTACAGTT TCAAGCGCGG GCCCGATGGC
CAGCGTTATG CCGTGTCCGG CGAAGTCAGC ATCGATACCG CGCCCGTTCC CAACGACCCT
GAAGCCACCT TGCGCAAGAT GGAGATCGTC CTGCGCGCGG CGCTGGCCCC GGTTGAACCC
TCTGCGCAGG ACCTGCGCGT GGCTGCGCTG GCTCAGGCGC AGGCCGCCCA GGCACGCGTC
GAGCTGGCCG AGCTGCGTCG TGAGGAAGCC GCGGCGGCGG AGCAGGCGCG CGACGAACGC
GCACGGTCCC GGCGCGACGA ACAGGAACAG ACGAGCCAGC AGCGGCAAGC CCCGCCGTCT
GCGCCTAGTC TTGATCTGTA TCGGCGCCTG GGTGAATTGC CGGCGCCTGA GCCGCGTGTC
GATCTGGTCG CGTAG
 
Protein sequence
MLIGNSLPSF APAPSAAPAR PLSSDVSPDM LRADLPPVAA AQEQQADSAA SEREEADRPA 
TEGRAGDSEP SPQEQRLEQL EIAELAQRDR EVRAHEQAHA AVGGQYAGAP TYSFKRGPDG
QRYAVSGEVS IDTAPVPNDP EATLRKMEIV LRAALAPVEP SAQDLRVAAL AQAQAAQARV
ELAELRREEA AAAEQARDER ARSRRDEQEQ TSQQRQAPPS APSLDLYRRL GELPAPEPRV
DLVA