| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4074 |
|---|
| Symbol | |
|---|
| ID | 5106371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4463332 |
|---|
| End bp | 4463925 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640505338 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001189553 |
|---|
| Protein GI | 146309088 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGCA CCCTGCTCGA CCTCGCCACT GCCCGCGTCA TGCCCCGGAA GAACGGCGGC
GGCGAAACCC TGGAACTGGC CATCGCGCCG GCGGGCGCCG GGCTGGAGGA TTTCGCCTGG
CGCATCAGCA GCGCACGGGT CGGTGCGGCG GGCCCCTTCT CGAACTTTGT CGGCATCGAT
CGCAGCCTGG CGCTGCTCGA CGGCGAAGGC CTGTGCCTGC GGCGCGGCGA CGGCAGCAGT
GAGGAGCTGC TCAGCGGCGG CATGGCGGCT TACTTCCCCG GCGAGGAACC GATCGAGGCG
ACACTGCTGG ACGGGCCGGT CAACGACCTC AACCTGATGA CCCGGCGCAC GGCCTGGCGC
CATCGCCTCG CTCCACTGCC TGTACAGGGC CAACGTACGC TGGATAACGA CGCCGCACTG
CTGTTGCTCT GGTGCCAGCG CGGCACGGCC ATCGCCTGTC GCCTGCCGAG TGGCGAACGG
CGCCAACTGG ACAGCGGCCA GGGCCTGCTG CTGGAGGACG AGCCCGGCCT GCTGGAATTG
CACGCGCAGC AATCCGCCCT GCTCTATGTG GCCTGGCTGT ATCGGCAGGG CTGA
|
|---|
| Protein sequence | MPCTLLDLAT ARVMPRKNGG GETLELAIAP AGAGLEDFAW RISSARVGAA GPFSNFVGID
RSLALLDGEG LCLRRGDGSS EELLSGGMAA YFPGEEPIEA TLLDGPVNDL NLMTRRTAWR
HRLAPLPVQG QRTLDNDAAL LLLWCQRGTA IACRLPSGER RQLDSGQGLL LEDEPGLLEL
HAQQSALLYV AWLYRQG
|
|---|
| |