Gene Pmen_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4073 
Symbol 
ID5106370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4461887 
End bp4463104 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID640505337 
Productimidazolonepropionase 
Protein accessionYP_001189552 
Protein GI146309087 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC AATCAACTTC GAAACGGCTG TGGCGTGATG TGCAGGTCTT CGATGGCCTG 
GTGCAGCTGA GCGAGGCGAT GACCGTGCTG GTCGAGGACG GGCGCATCGC CGGTCTGTGG
CCGGCGCGCG AGTTCAACGA GGCGCACGCC CAGGGCGCTG CCTGCGCCGG CCGCGGCGGG
GTGCTGACTC CCGGCCTGGT CGACTGCCAC ACCCACCTGG TCTACGCCGG CAACCGCGCC
GGCGAGTTCG AGCAGCGCCT GGAGGGCGTC AGCTACGAAG AGATCGCCCG CGCCGGCGGC
GGCATTCTCA GCAGCGTGCG CGCCACTCGC GCGGCCAGCG AGGACGAGCT GATCGCCGCC
AGCCTGCCGC GTCTCGATGC GCTGCTGGCC GATGGCGTGA CCACGCTGGA GATCAAGTCC
GGTTACGGCC TGACCGTCGC CGATGAGCTG AAGATGCTGC GCGTGGCCCG CCGCCTCGGC
CAGCTGCGCC CGGTGCGGGT GATCACCACG CTGCTCGGCG CCCACGCACT GCCGCCGGAA
TACGCCGGTC GCGCCGACGA CTATGTGAGC CTGGTCTGCG ACGAGATGAT TCCGGCCGCC
GCCGCCGAAG GCCTGGCCGA TGCGGTGGAC GTGTTCTGCG AAGGCATCGG TTTCTCCCCG
GCGCAGTGCG AACGCATCTA TCAGGCAGCC CAGGCCCACG GCCTGGCCAT CAAGGCCCAT
GCCGAGCAAC TGTCCAACTT GGGCGGCAGT GCCCTGGCCG CACGCTACGG CGCGCTGTCG
GCCGACCATA TTGAATACCT GGATGAAGCC GGCGTGCGCG CCATGGCCGA AGCCGGCACC
GTCGCGGTGC TGCTGCCCGG CGCCTTCCAT GTGCTGCGCG AAACCCAGTT GCCACCCATC
GAGCTGCTGC GTCAGTACGG CGTGCCGATG GCCGTGGCCA GCGACGCCAA CCCCGGCACC
TCGCCGATCT GCATGCCCAC GCTGATGGCC AACCTGGCCT GCACCCTGTT CCGGCTGACC
CCGCGCGAAG CGCTGAGCGG CATGACCGCC CAGGCCGCCC GCGCCCTCGG GCGCCTCGAC
CTGGGGCGGA TCGCCGTCGG TGCGCCTGCC GACCTGTGCC TGTGGGACAT CCAGCAACCG
GCCGAACTGG CCTATGCGGT GCAGGCCGGG CGCCTGCGCC AGCGCGTTTT CAAGGGAGAA
GTGGTTTATG CACGCTGA
 
Protein sequence
MPTQSTSKRL WRDVQVFDGL VQLSEAMTVL VEDGRIAGLW PAREFNEAHA QGAACAGRGG 
VLTPGLVDCH THLVYAGNRA GEFEQRLEGV SYEEIARAGG GILSSVRATR AASEDELIAA
SLPRLDALLA DGVTTLEIKS GYGLTVADEL KMLRVARRLG QLRPVRVITT LLGAHALPPE
YAGRADDYVS LVCDEMIPAA AAEGLADAVD VFCEGIGFSP AQCERIYQAA QAHGLAIKAH
AEQLSNLGGS ALAARYGALS ADHIEYLDEA GVRAMAEAGT VAVLLPGAFH VLRETQLPPI
ELLRQYGVPM AVASDANPGT SPICMPTLMA NLACTLFRLT PREALSGMTA QAARALGRLD
LGRIAVGAPA DLCLWDIQQP AELAYAVQAG RLRQRVFKGE VVYAR