| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4068 |
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| Symbol | |
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| ID | 5106365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4455057 |
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| End bp | 4455809 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505332 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001189547 |
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| Protein GI | 146309082 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.232008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCATC CGCGCACCGG GCATTTCCAA GGAGCAGCCG TGACCAGTCC CACCCCGCGC
TACAAGGCCA TCGAGGATTT CCTCCTCGAG CGCATTCACG GCGGTGCCTA TCCGGTCAAT
CACCAGATTC CGCCCGAGGA GCAACTGGCG CGGGATTTCT CCGTCAGCCG CATGACCGCC
AACAAGGCGA TCCAGAACCT GGTGCAAAAG GGCTATCTGG TGCGCCAGGC CGGCCTCGGC
ACCTTCGTCA CCGATCGCAA GGCCGAGTCG CCGCTACACG AGGTGATGAA TATCGCCAGC
GAAGTGCGCG GCCGCGGCCA CGAATACAGC AACGAAGTGG TTCGCTGCGA GGCCATCGCC
GCCGATGATG AAGTGGCCCT GCGCCTGGGG CTGCGTCTGG GCGCCGAGGT GTTTCACAGC
ATCCTCGTGC ACCAGCAGGA CGGCCTGCCG ATCCAGCTCG AGGATCGCTT CGTCAACCCA
CGCTGGGTGC CGCATTACCT GCAGAGCGAC TTCACCCAGG TGACGCCCAA CGAGGTGCTG
GTCGCCAGTT GCCCGATTTC GGATGTCGAG CATGTGGTCG AAGCGGTGTT GGTGGATGCG
CGCACGGCCG AGCTGCTGCA GATCGACCCG GCCATGCCCT GCCTGAGCGT GATCCGCCGT
ACCTGGTCGG ACGATCACCT GATCAGCTAC GCGCGGCTGA TCCACCCCGG CGACCGCTAC
AAGCTGCGTT CGCTGCATAA ACGCAGAGCG TAG
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| Protein sequence | MYHPRTGHFQ GAAVTSPTPR YKAIEDFLLE RIHGGAYPVN HQIPPEEQLA RDFSVSRMTA
NKAIQNLVQK GYLVRQAGLG TFVTDRKAES PLHEVMNIAS EVRGRGHEYS NEVVRCEAIA
ADDEVALRLG LRLGAEVFHS ILVHQQDGLP IQLEDRFVNP RWVPHYLQSD FTQVTPNEVL
VASCPISDVE HVVEAVLVDA RTAELLQIDP AMPCLSVIRR TWSDDHLISY ARLIHPGDRY
KLRSLHKRRA
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