Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4067 |
Symbol | |
ID | 5106364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4454269 |
End bp | 4454928 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505331 |
Product | endonuclease I |
Protein accession | YP_001189546 |
Protein GI | 146309081 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0378834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCACTG CCATCCTGCT TCTCGGTTGC CTGGCAACCT GTATCAGCCT GCCTGCCGTC GCCAGCGGGC AGAATCAGCT GGGCGACCCC AAGCAGGCCA TCGAACAAGC CTTCTGGAAA GACCTCTACG GCACCGGCGG TACTTCGCTG TACTGCGGCC AGACGTTCAC GACTCCCGGC AGCACCTTCA CCGCCAGCCC CATCTACAGC AGCAAGCAGC TCAAGAGCGC GCTGCGCTGC GTCACCGACC GCCAGTGCAC CATCATGAAT CCGCGCTACC CCTTTATCGC GGCGGATCTG CACAACCACT ACCCGGCCCT GACCCGCGTC GAGCTGGCAC GACGCAATGC CCAGTTCGCC GAGCTGGCCG CCGACGTGCC GAGCAAGTTC GCCGACATCG GCTGCGACAT GAAGACCAGC TTCCAGCTGG TGGAGCCACG CGACGAGGCC AAGGGCAATA TCGCCCGGGC GATCTTCTAC ATGCACGTGG AGTACGACCT GCCCATCGTC GGCCTGGTGT CGATGTACAA GAACTGGCAC CGCATGGACC CGCCGGACGC GGAAGAAAAG GCGCGCAACG ACAAGATCGA GGTGCTGCAG GGCACGCGCA ATCGCTTTAT CGACGATCCG TCACTGGTGG ATCAGCTGAT CGCCGATTGA
|
Protein sequence | MRTAILLLGC LATCISLPAV ASGQNQLGDP KQAIEQAFWK DLYGTGGTSL YCGQTFTTPG STFTASPIYS SKQLKSALRC VTDRQCTIMN PRYPFIAADL HNHYPALTRV ELARRNAQFA ELAADVPSKF ADIGCDMKTS FQLVEPRDEA KGNIARAIFY MHVEYDLPIV GLVSMYKNWH RMDPPDAEEK ARNDKIEVLQ GTRNRFIDDP SLVDQLIAD
|
| |