| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4062 |
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| Symbol | |
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| ID | 5106359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4446221 |
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| End bp | 4446931 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505326 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001189541 |
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| Protein GI | 146309076 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.508438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGTT CACTCGAACA GATGACCGTC TGGGGGCTGG TCAGCGAGGC CAGCCTGCTG
GTGCAGGCGG TGATGCTCAG CCTGGTGCTG GCGTCGCTGG TCAGCTGGTA CTTGATCGTC
CAGCGCAGCG CCGTGCTGCG CCGCAGCGAA CGCGAGGCGA AAGCCTTCCT GCAGCGCTTT
CGCGGCAGCG CCGAGCTGGC CCAGCTGCAG CGTGAATGCG CCGCCGAAGC CGACCAGGAC
GCCGGTGTGC AGCAGCTGTT TCAGGCCGGC TACGGCGAGT ACCTGCAGCT GCAGCGCGAG
CCCGGCATCG CCGCCGACGC GGTGATCGAA GGGGTCGAGC GCAGCCTGCT GGTGGCCATC
GCCGAACAGG AGGAGCGCCT GGAAAAGGGC CTGCCGCTGC TCGCCACGGT CGGCTCGGTG
AGCCCCTATG TCGGCCTGTT CGGCACCGTC TGGGGCATCA TGAATTCCTT CATCGGCCTG
TCGCAGGTGC AGCAGGCGAC CCTCTCCACC GTCGCCCCGG GCATCGCCGA GGCGCTGATC
GCCACCGCCA TCGGCCTGTT CGCCGCGATT CCCGCGGTGA TTGCCTACAA CCGCTTCTCC
GCGCGTGTGG CAGGCCTCGG CGCGCGCTAC TACAGCTTCG CCAACGAACT GCAGGGACGC
CTGCAGCGCA GGCTGCACAG CAGCGCCAGC CGCATCGCCG CAGCGGCCTG A
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| Protein sequence | MHSSLEQMTV WGLVSEASLL VQAVMLSLVL ASLVSWYLIV QRSAVLRRSE REAKAFLQRF
RGSAELAQLQ RECAAEADQD AGVQQLFQAG YGEYLQLQRE PGIAADAVIE GVERSLLVAI
AEQEERLEKG LPLLATVGSV SPYVGLFGTV WGIMNSFIGL SQVQQATLST VAPGIAEALI
ATAIGLFAAI PAVIAYNRFS ARVAGLGARY YSFANELQGR LQRRLHSSAS RIAAAA
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