| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4060 |
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| Symbol | |
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| ID | 5106357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4444973 |
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| End bp | 4445764 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640505324 |
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| Product | TonB family protein |
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| Protein accession | YP_001189539 |
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| Protein GI | 146309074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.910663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC TGATCCTGCC CGCCGAGCAA GACATGCGAC GCCCGCTAGT GGCCTCGGTG
CACTGGCGCC GTCGTTGCGT CGCGCTGGCG GCCACCCTGG CCCTGCACCT GGGGCTGGGC
GCACTGCTGC TCGCCCACTG GCAGGTCGGC GAGCCTCCCG CGCCGCAGGT CAGCACGGTG
CAGCTGCAAC TGCTGACCCT GGCCCCGCCA GCGCCGCCGG CGCCGCCCGT GGCGCTTCCC
GAACCGCCGC CGGTGCAGTC GGCGCAGCCC GATCCGGCCA TCGAACGCCA GCGTCTGGAG
CAGGCCGCCC TGGCGCGCAA ACGCGCCGAG CAGCAGCGCC TGGAACAGGA GCAGCAACGC
CAGCGCGAGG CGCAGCAGCG TGAGCAGGAG CGTCAGCGCC GCGAGGCCGA AGCCCGTGAG
CAGCTCGAGC AGCAGCGCCT GGCCGAGGCC CGCGAACAGG CCGAGCGTCA GCGGGCGGCT
GCGGCAGCCG AACGCGCGCG CCAGGCCGAG GCGGCCGCCG CCAGCCGCGA GTTCCTGCCG
ATTGCCAAGC AGGCCCCGGC CTATCCACAG CGCGCCCTGG ACAAGGGCCT CGAAGGCCAG
TGCACGGTGC GTTACCGGGT CAACGAGCAG GGCCGGGTGG AAAACCCCGA GGCCGAACCC
GACTGTCACC CGCTGTTCGT CCGCCCCTCG CTGAACGCGG CGAAGAGCTT TCGCTACCAA
CCACGGGTGA TCGACGGCCG CGCCGTGGCG GTCAGCAACG TGAGGAACAC CTTTACCTAC
CGCATCGAAT GA
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| Protein sequence | MSSLILPAEQ DMRRPLVASV HWRRRCVALA ATLALHLGLG ALLLAHWQVG EPPAPQVSTV
QLQLLTLAPP APPAPPVALP EPPPVQSAQP DPAIERQRLE QAALARKRAE QQRLEQEQQR
QREAQQREQE RQRREAEARE QLEQQRLAEA REQAERQRAA AAAERARQAE AAAASREFLP
IAKQAPAYPQ RALDKGLEGQ CTVRYRVNEQ GRVENPEAEP DCHPLFVRPS LNAAKSFRYQ
PRVIDGRAVA VSNVRNTFTY RIE
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