| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4058 |
|---|
| Symbol | |
|---|
| ID | 5106355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4441638 |
|---|
| End bp | 4442516 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640505322 |
|---|
| Product | alpha/beta hydrolase-like protein |
|---|
| Protein accession | YP_001189537 |
|---|
| Protein GI | 146309072 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4757] Predicted alpha/beta hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CCATCCGCAG CGAAACCCTG CCCCTGCTCG CCCTGGACGA CTATCAGCTG
AGCGCCACCC GCTATCACGC GCCACAGCCA CGGGCGCAGT TGCTGATCGC CGGCGCCACC
GGCGTGCCGC AGGGGTTCTA CCGGCGCTTC GCCGAACATG CGGCCAGCCG CGGTTTCACC
ACCCTGACCC TGGACTACCG CGGCGTCGGC CAGTCCAGGC CGGCCAGCCT GCTCGGCTTC
GAGATGGACT ACCTGGACTG GGCCCACCTC GATCTGGCCG CCGCGGTGGA TCAGCATCGG
CATGCCGAAC GCCCGCTGTT CATGGTCGGC CACTCCTTCG GCGGCCATGC CTTCGGCCTG
CTGCCCAATC ATGATCAGGT GACCGGCTTC TACACCTTCG GCACCGGCGC CGGCTGGCAT
GGCTGGATGC CCAGGGCCGA GCAGGTTCGC GTGCTGGCCA TGTGGCGCGT GATCGGCCCG
CTGATGACGC GCTACAAGGG CTACCTGGCC TGGAGCAAGC TGGGCATGGG CGAGGATCTG
CCCATGGGCG TGTATCGCCA GTGGAAGCGC TGGTGCCGCT ACCCGCGCTA CTTCTTCGAC
GACCCGCAGA TGCCGGGACT GGCCGAGCGT TTCGCCCAGG TGAGTACCCC CATGGTGGCG
CTCAATGCCC TGGACGACCT GTGGGCCCCG CCCGCCTCGC GCGATGCCTT CATGGCCGCC
TATGTCAACG CGCCCTACCA GGCCCGCACG CTCGACTCGC AGGCCGAGGG CCTGGGCAAT
ATCGGCCATA TGGGCTACTT CCGCCCCGCC GCCCAGCGCC TGTGGGACGA GACCCTGGAC
TGGTTCGAGC AGCTGCACGC CAAGCCCCAG GCGGCCTGA
|
|---|
| Protein sequence | MNATIRSETL PLLALDDYQL SATRYHAPQP RAQLLIAGAT GVPQGFYRRF AEHAASRGFT
TLTLDYRGVG QSRPASLLGF EMDYLDWAHL DLAAAVDQHR HAERPLFMVG HSFGGHAFGL
LPNHDQVTGF YTFGTGAGWH GWMPRAEQVR VLAMWRVIGP LMTRYKGYLA WSKLGMGEDL
PMGVYRQWKR WCRYPRYFFD DPQMPGLAER FAQVSTPMVA LNALDDLWAP PASRDAFMAA
YVNAPYQART LDSQAEGLGN IGHMGYFRPA AQRLWDETLD WFEQLHAKPQ AA
|
|---|
| |