| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4050 |
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| Symbol | |
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| ID | 5106347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4433541 |
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| End bp | 4435853 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505314 |
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| Product | oxidoreductase alpha (molybdopterin) subunit |
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| Protein accession | YP_001189529 |
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| Protein GI | 146309064 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC GATTCAAACC CTATCGTGGC CCCTCGGGCG GCTGGGGCTC GGCCTATTCG
GTGGGCAGCA TCCTGCTGCG CGAGCGTGCC CCGCTGACCG GCGCCATGGC CTTGCTCAAG
CAGAACCGGC CGATCAGCGG CTTTGCCTGC GTCAGTTGCG CCTGGGCCAA GCCGCACCCC
TCCAAACCGC TGGCCTTCTG CGAGAACGGC GCCAAGGCCA CGGCCTGGGA AACCACCAGC
CTGCGCTGCA CCCCGGAGTT CTTCGCCCAG CACCGCCTGA GCGAGCTGCG TAACTGGAGC
GATTACGATC TGGAGCAGCA GGGCCGACTG ACCCACCCGA TGCGCTGGGA TGCCACCAGC
GACCGTTACC TGCCAGTCAG CTGGGATCAG GCCATCGCCG AGATCGGCGC CGAGCTCAAG
GCACTCGATG ACCCCGATCA GGCGGTGTTC TACGCCTCCG GCCGGGCCTC GTTGGAAGCC
TCCTACCTGT GGCAGCTGCT GGCCCGTCGC TTCGGCACCA ACAACCTGCC GGACAGTTCC
AACATGTGCC ACGAGAGCAC CTCGGTGGCG CTGCCGGAGA GCATCGGCGT ACCGGTCGGC
ACCGTCACCC TCAACGACTT CGCCAAGACC GATGGCATCC TCATCTTCGG CCACAACACC
AGCAGCAACA GCCCGCGCCT GCTGCACGAC CTGGAGGCCG CGCGCGGCCG CGACGCGCCC
ATCCTCACCT TCAACCCGCT GCGCGAGCGC GGCCTGGAGC GCTTCACCGA CCCGCAGTCG
CCGACGCAGA TGCTCAGCGG CCACTCCATC GTCGTCAGCA CCCACTATCA CCAGGTCGCC
ATCGGCGGCG ACGTGGCGGC CATCGCCGGC ATCTGCAAGG CCCTGCTGGC GCTGGACGAC
GAGGCGCTCG CCAGCGGCCA GCCCAGCGTG CTGGACCGCG TCTTCATCGA GCAGCACACC
CAGGGCTTCG AGGCCTTCGA GCAGGCCGTC CGCGCTTATG CCTGGGCGGA CCTGGAGCGC
CGCAGCGGCC TGACCCGCGG CGCCATGGAG GGCGCAGCCA AGGTCTATGC CGGCTGCCAG
CGGGTCATCG CCATCTACGG CATGGGCCTG ACCCAGCATC GCCACGGCGT GACCAACATC
CAGATGCTGG TCAACCTGCT GCTGATGCGC GGCAACCTGG GCAAGGAAGG CGCCGGCATC
TGCCCGGTGC GCGGCCATTC CAACGTGCAG GGCCAGCGCA CCGTGGGCAT CACCGAACAG
GTGGCGCAGG TGCCGGTGGA GCGACTGCGC GAGCAGTTCG CCTTCGAGGT GCCGGCAGAG
GATGGCGTCA GCACCGTCGA TGCCTGCGAG GGCATCATCG CCGGCCGCAT CCGCGCCTTC
CTCTCGCTGG GCGGCAACTT CGTCCGCGCC GCACCGGACA GCCATCGCCT GGAACCGGCC
TGGAGCAAGC TGCGCCTGAC CGTGCAGATC GTCACCAAGC TCAACCGCAG TGCCCTGGTG
CATGGCGAGA AGGCCTACAT CCTGCCCTGT CTCGGCCGCA CCGAAATGGA CAGGCAGGCC
AGCGGCCTGC AGTACCACAC CACCGAAGAC AGCACCGCCT GCATCCGTGC CTGGCAGGGG
GTGGTCAAGC CGGCCGGCGA ACTGCTGCGT TCGGAGCCGG CGATCATCGC CGCGCTGGCC
AAGGCCACCC TGCCCGACAA CCCGTTGATG AACTGGGACG CCTGGGTGGC CGACTACGGG
CTGATCCGCG AGGCCATCGC CGGCAGCTAT CCGGAGATCT TCCACGACTT CAATACGCGC
ATGCTCGAGC CCGGCGGCTT TCACCGGCCG CTGGGGGCCA GCCAGCGGCA ATGGGCCACC
GACAGCGGCC GGGCCAACTT CATGGTGCCC AGCACCCTGG CGGTGAACGA CGACGTCGAG
CCGGACCCGG AGCGCCGCGA CGTGCTGAAC CTGATGACGG TGCGCAGCAA TGACCAGTTC
AACACCACGG TGTATGGCTA CAACGACCGC TTTCGCGGCA TCCATGGCAC CCGCTCGGTG
ATTCTCATGC ACCGCAACGA CATGACCCGG CTGGCGCTGA ACGAGGGTGA TCAGGTGCAG
GTGAGCACCG CCGTGGACGA CGGCGTGCAG CGCTCGGTCG GGCCGCTGCG CGTCACCCCG
CACGACATCC CCGAAGGCTG CTGCGCCGCC TACTACCCCG AGTGCAACCC GCTGCTGCCG
CTCTGGCACC ACGAGGAGAA GGCCAAGGTG CCGGCGGCCA AGTCGATCCC GGTGACCCTG
CGCCGCCTGA TCGCCATGGC CCAGGCGCGC TAG
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| Protein sequence | MKPRFKPYRG PSGGWGSAYS VGSILLRERA PLTGAMALLK QNRPISGFAC VSCAWAKPHP
SKPLAFCENG AKATAWETTS LRCTPEFFAQ HRLSELRNWS DYDLEQQGRL THPMRWDATS
DRYLPVSWDQ AIAEIGAELK ALDDPDQAVF YASGRASLEA SYLWQLLARR FGTNNLPDSS
NMCHESTSVA LPESIGVPVG TVTLNDFAKT DGILIFGHNT SSNSPRLLHD LEAARGRDAP
ILTFNPLRER GLERFTDPQS PTQMLSGHSI VVSTHYHQVA IGGDVAAIAG ICKALLALDD
EALASGQPSV LDRVFIEQHT QGFEAFEQAV RAYAWADLER RSGLTRGAME GAAKVYAGCQ
RVIAIYGMGL TQHRHGVTNI QMLVNLLLMR GNLGKEGAGI CPVRGHSNVQ GQRTVGITEQ
VAQVPVERLR EQFAFEVPAE DGVSTVDACE GIIAGRIRAF LSLGGNFVRA APDSHRLEPA
WSKLRLTVQI VTKLNRSALV HGEKAYILPC LGRTEMDRQA SGLQYHTTED STACIRAWQG
VVKPAGELLR SEPAIIAALA KATLPDNPLM NWDAWVADYG LIREAIAGSY PEIFHDFNTR
MLEPGGFHRP LGASQRQWAT DSGRANFMVP STLAVNDDVE PDPERRDVLN LMTVRSNDQF
NTTVYGYNDR FRGIHGTRSV ILMHRNDMTR LALNEGDQVQ VSTAVDDGVQ RSVGPLRVTP
HDIPEGCCAA YYPECNPLLP LWHHEEKAKV PAAKSIPVTL RRLIAMAQAR
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