Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4048 |
Symbol | |
ID | 5106345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4430311 |
End bp | 4431696 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505312 |
Product | citrate transporter |
Protein accession | YP_001189527 |
Protein GI | 146309062 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACCC TCGGTATTCT GATTTCCCTC GCCTTGTTGA TGTACCTCGC CTACCGCGGC ATCAACGTCC TGATCCTCGC TCCGCTGCTG GCCCTGCTGG CCCTGCTGTT CGCCGGCGAC GTCGGCCTGC TGCTGCCCAC CTACACCCAG GTGTTCATGA AGGCCATGGG CGGCTACGTG ATTCAGTTCT TCCCGCTGTT CCTGCTCGGC GCCCTGTTCG GCAAGCTGAT GGACGACTCG GGATCGGCGC GCGCCATCGC CCACGGCATC GTGGCCAAGG TCGGCAGCGA GCGCGCCATC CTGGCCATCG TGCTGGCCTG CGGCATCCTC ACCTACGGCG GCGTGTCGCT GTTCGTGGTG GCCTTCGCCG TGTATCCGAT CGGCGCAGCG CTGTTTCGCG AGGCGGGCAT TCCCAAACGC CTGATCCCCG GTGCCATCGC CCTCGGCTCG TTCACCTTCA CCATGACCGC CCTGCCCGGC ACCCCGGCGA TCCAGAACGC CATTCCCAAC CCTTTCTTCG GCACCGACGC CTTCGCCGCG CCGGGCCTGG GGGTGATCGC CGGGCTGATC ATGTTCGGCC TCGGCACCTG GTGGCTCACC GCGCAGTCGC GCAAGCTGAT GGCTGCCGGC GAAGGCTACG GCGAGCATCG CGATGACCCG GTCAGCGAAG AGCGCCGCGA CATTCCCGGC TTCTGGCTGG CGCTGCTGCC GATCTTCGTG GTGATCGCGC TGAATTTCCT GATGGCCAAG CAGATCCTGC CGGCCGTGGA CACCAGCTAC CTGGCCAAGC CGGAATACGG CGGCCTGCAG GACGCCAAGT CGCTGATCGG TATCTGGTCG ATCATCGTCG CCCTCAGCGC CGCCATCGTG CTGCTGATCG CTCTGCACTG GAAACGCTGG ATGGACCTGA AGAAGAGCGT CAACGAGGGC GCCTTCGGCT CCATGCTGCC GATCCTCAAT ACCGCTGCCG AGGTGGGTTA TGGCACGGTG ATCGCCTCCC TGGCCGGCTT CGTGGTCATC CGCGACCTGG TGCTGGGCGT CTCCAGCAAC CCGCTGATCT CCGAAGCGGT GGCGGTGAAC ATCCTCGCCG GTATCACCGG TTCGGCCTCC GGCGGCATGT CCATCGCGCT GAAGACCTTG GGCGAGCAAT ACCTGACCAT GGCCAACGCC GCCGGCATCA GCCCCGAACT GCTGCACCGC GTCGCCGCCA TGGCCTCTGG CTGCATGGAC ACCCTGCCGC ACAACGGCGC GGTGATCTCG CTGCTGGCGA TCTGCAAGCT CACCCACCGC GAGTCGTACA AGTTCATCTT CGTCAACACC GTGGCCTTCC CGCTGATGGC GCTGGCCGTG GTCATCACGT TGGGCACGCT GTTCGGCAGC TTCTAA
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Protein sequence | MGTLGILISL ALLMYLAYRG INVLILAPLL ALLALLFAGD VGLLLPTYTQ VFMKAMGGYV IQFFPLFLLG ALFGKLMDDS GSARAIAHGI VAKVGSERAI LAIVLACGIL TYGGVSLFVV AFAVYPIGAA LFREAGIPKR LIPGAIALGS FTFTMTALPG TPAIQNAIPN PFFGTDAFAA PGLGVIAGLI MFGLGTWWLT AQSRKLMAAG EGYGEHRDDP VSEERRDIPG FWLALLPIFV VIALNFLMAK QILPAVDTSY LAKPEYGGLQ DAKSLIGIWS IIVALSAAIV LLIALHWKRW MDLKKSVNEG AFGSMLPILN TAAEVGYGTV IASLAGFVVI RDLVLGVSSN PLISEAVAVN ILAGITGSAS GGMSIALKTL GEQYLTMANA AGISPELLHR VAAMASGCMD TLPHNGAVIS LLAICKLTHR ESYKFIFVNT VAFPLMALAV VITLGTLFGS F
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