| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4045 |
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| Symbol | |
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| ID | 5106342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4426490 |
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| End bp | 4426966 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505309 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001189524 |
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| Protein GI | 146309059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.918417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC AAGTCGACGC GCCGCTGGAG CGCGTGCTCG CCACCCTGGC CCTGGTGATC
ATCAGCCTGA TCAGCCTGGC CAACGTCGTG GTGCGTTATT TCACCGATGC ATCCTTCGCC
TTCACCGAGG AAATCTCGGT GTTCCTGCTG GTCATCCTCA CCTTCGCCGG TGCCTCGGTG
GCCATGCGCA GCAACCGGCA CATTCGTATC GGCCTGCTCG AGCGCCTGTT CCCGCGCCTG
CGCACGCCGC TGATCCTGCT GCAGTGGCTG GCCGGTGTGC TGGTGCTGGC TCTGGTGTGC
TGGTTCGGCG GTCAGTTCGC CTGGGAGGAA TTCCAGTGGG ATTCCGAGTC GCCCGGTCTG
GGCCTGCCCA ACTGGTGGTA CGTGATCTGG CTGCCGATTC TGGCGCTGCT GGTGTTCGTA
CGCCTGACCC AGATGACCCT CGACCGCCTG CGCGGGAGGA TCAGCGATGA GCCCTGA
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| Protein sequence | MSKQVDAPLE RVLATLALVI ISLISLANVV VRYFTDASFA FTEEISVFLL VILTFAGASV
AMRSNRHIRI GLLERLFPRL RTPLILLQWL AGVLVLALVC WFGGQFAWEE FQWDSESPGL
GLPNWWYVIW LPILALLVFV RLTQMTLDRL RGRISDEP
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