Gene Pmen_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4036 
Symbol 
ID5106333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4416852 
End bp4417949 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content55% 
IMG OID640505300 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_001189515 
Protein GI146309050 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC TTTTAGACCT CTTCAGTGGG TGTGGTGGCC TCACCCTTGG CGCCAAACAA 
GCCGGATTCA CCACGGAGCT TGCGGTTGAC ATCGACCCCA TTCTCTCCAG CTCATTTGGG
CTGAATTTCC CGTCGGTTCC TTTCCTCAAT GCCGACGTCA CTACGCTGAC AAGCGACCGA
CTTAAAGCCC TTCTACCTAG CGGTGTCGAT GGGGTAATCG GGGGGCCTCC CTGCCAGGCC
TTTAGCGGGA TGGGAAGGGG CTTAGCAGAC GACCCCAGAC GCTCGCTGCT GGGCGAGTTC
TTCCGAATTG TGGCGACTGT AAAGCCTGCA TTTTTCATGA TGGAAAACGT GCCAGGCTTG
GTCTTCCCAG CCAACAGACC CGTTCTTGAG GAGGCCATCG CCTCCCTGGG AGGGAAATGG
CAGATAGTCG GCCCTGTTGT TTTAGATGCA TCTGACTTTG GCGCTCCTAC AAAGCGCCGC
CGTGTTTTTG TGTTTGGTTT CGATAAGCAG AGAATGCGGG TTCCCAGCCT AGAGAACCTG
ACCCAATCAG ATGCTCTGAG GGTCAACGTT CATGAAGCGA TCGGAGATTT GTCTGCTTCA
AGAGCCGTTC GGGGAAACCC TAATCTTTGG AAATACGGCC CCCGCAAGGC TTCTGCTTAC
GCTCAGAAGC TGCGCGCACA GTCAGGGGTC TTCACAGGCC ACCAGTTAAC CGAACATCGG
GCCGAGACAG TCGAGCGATT CCAGTCAGTC CCGCAAGGAG GCGTCGATCC GGTAGGGAAA
TATAAACGGC TTGCTTGGGA TGGCTTATGC CCTACCTTGA GGGCCGGGAC TGGTAGTGAT
CGTGGCTCCT ACCAAGCAGT GAGGCCGTTA CATCCGGTAG AGAATCGTGT GATCACTCCC
CGCGAGTGCG CCAGGCTTCA AGGATTCCCT GATGATTTCA TTTTCCATCC AACCGTGTGG
CATAGCTGCA GGATGATCGG CAACAGCGTC TCTCCGATAA TCGCAGCAGC ACTACTGAGC
AATATCAGGG CCTATCTGGA GCATGATTCG GTAGCCACTG GAAGAGAAGA GCAACCATTA
GAAATGGCCA CGACCTAG
 
Protein sequence
MLTLLDLFSG CGGLTLGAKQ AGFTTELAVD IDPILSSSFG LNFPSVPFLN ADVTTLTSDR 
LKALLPSGVD GVIGGPPCQA FSGMGRGLAD DPRRSLLGEF FRIVATVKPA FFMMENVPGL
VFPANRPVLE EAIASLGGKW QIVGPVVLDA SDFGAPTKRR RVFVFGFDKQ RMRVPSLENL
TQSDALRVNV HEAIGDLSAS RAVRGNPNLW KYGPRKASAY AQKLRAQSGV FTGHQLTEHR
AETVERFQSV PQGGVDPVGK YKRLAWDGLC PTLRAGTGSD RGSYQAVRPL HPVENRVITP
RECARLQGFP DDFIFHPTVW HSCRMIGNSV SPIIAAALLS NIRAYLEHDS VATGREEQPL
EMATT