Gene Pmen_4027 details

Gene Information

• Locus tag: Pmen_4027
• Symbol: dnaG
• ID: 5106324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 4402883
• End bp: 4404874
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640505290
• Product: DNA primase
• Protein accession: YP_001189506
• Protein GI: 146309041
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.570104
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGGCC TGATTCCGCA ATCCTTCATC GATGACCTGC TCAACCGCAC CGACATCGTC 
GATGTGGTGA GTTCGCGCAT CCAGCTGAAG AAGACCGGCA AGAACTACAG CGCCTGCTGT 
CCGTTCCACA AGGAAAAGAC CCCCTCCTTC ACCGTCAGCC CGGACAAGCA GTTCTACTAC 
TGCTTCGGCT GCGGCGCCGG CGGCAATGCC CTCGGCTTCG TCATGGACCA CGATCAGCTG 
GAATTCCCCC AGGCGATCGA GGAACTGGCC AAGCGCGCCG GCATGGACGT GCCGCGCGAG 
GAAGGTGGTC GCGGGCGCAC ACCGCGCCAG CCGGTGGACT CGCCGCTCTA CCCGCTGCTG 
GAGGCCGCCG CCGAGCATTA TCGCCAGGCG CTGAAGAGCC ACCCGCAGCG CAAGTACGCC 
GTGGACTATC TCAAGGGCCG CGGCCTGACC GGTGAAATCG CCCGCGACTT CGGCCTCGGC 
TTCGCCCCGC CCGGCTGGGA CAACCTGCTC AAGCAGCTGG GCGGCGACGC CCTGCAGCAG 
AAGGCGATGA TCGACGCCGG CCTGCTGATC GAGAACGCCG ACAACGGCAG GCGCTACGAC 
CGCTTCCGCG ACCGCATCAT GTTCCCCATC CGCGACAGCC GCGGCCGGGT GATCGCCTTC 
GGCGGCCGGG TACTGGGCGA CGACAAGCCC AAGTACCTCA ACTCGCCGGA AACCGCGGTG 
TTCCACAAGG GCCAGGAGCT CTACGGCCTG TACGAGGCAC GCAAGCACAA CCGCGACCTC 
GACGAGATCA TGGTGGTCGA AGGCTACATG GACGTCATCG CCCTGGCCCA GCAGGGCCTG 
CGCAATGCCG TGGCGACCCT GGGCACGGCC ACCAGCGAGG AGCACCTCAA GCGTCTGTTT 
CGCATCGTGC CCAGCGTGCT GTTCTGCTTC GACGGCGACG CCGCCGGGCG CAACGCCGCC 
TGGCGCGCCC TGGAATCCAC CCTGCCGAGC CTGCAGGACG GCCGCCGCGC ACGCTTTCTG 
TTCCTGCCCG AAGGCGAAGA CCCGGACACC CTGGTGCGCG CCGAGGGCAC CGACGCCTTC 
CGCGCACGCA TCAACCAGCA TGCCCAGCCG CTGGCCGACT ACTTCTTCCA GCAGCTGTCC 
GAAGAAGCCG ACCCGCGCTC GCTGGAAGGC AAGGCGCACC TGGTGACCCT GGCCGCGCCG 
CTGATCGACA AGATTCCCGG CAACAACCTG CGCGCCCTGA TGCGCCAGCG CCTGAGCGAG 
ATCACCGGTC TTTCCGGCGA GGCCCTCAGC CAGGTGGCCA GCGCCCCGCG CAGCCACGCA 
CCGAGCACCA TCAGCCAGGC GCCCAGCAGC GACTATCCGG ATTACGGCGA TATCCCCGAC 
AGCGCCTATT ACGACGCCAT GCCGGATCTC GGCGGCTACG AGCAGCCCGC CCCGCCCCAG 
CAGCAGGCTT ACGAGCGCAG CAACGACGGC GGCAAGGGCA ACTGGAAGAA AGAAGGCGGC 
AAGTGGAGCA AGAAGGGCAA GGGCGACTTC GCCCCGCGCG CGCCACGCAC CGCCGTCAGC 
GTCGAATCGC CGCATCTGAG CGCCCTGCGC ACTCTGCTGC ACCATCCGCA ACTGGCGCAG 
AAGGTGGAGG ATGTCAGCCA CTTCGCCGAC GAGGAAGACA CCTACGCGCA GCTGCTGGTG 
GCCCTGGTCG GCGCCTTGCA GAAGAACCCC GGCATGCGCT CGCTGCAACT GATCGCGCGC 
TGGCACGGCA CCGAACAGGG CCGTCTACTA CGGGCCCTGG CGGAAAAGGA ATGGTTGATT 
TCGGCGGACA ACCTTGAACA ACAGTTTTTC GACACTATAA CTACTCTTGC AGCCCGCCAA 
CGCGAGCGCA GCCTGGAGCA GTTGCTGCGC AAGGCCCGCC TAAGTGAGTT GAGCGCAGAG 
GAAAAAGATC AGCTGCGCGC CCTGCTAAGC CGTAACGCAT TACCAGTCTC CCCCTCCCCA 
ACTGGCGCGT AA 

 

Protein sequence

MAGLIPQSFI DDLLNRTDIV DVVSSRIQLK KTGKNYSACC PFHKEKTPSF TVSPDKQFYY 
CFGCGAGGNA LGFVMDHDQL EFPQAIEELA KRAGMDVPRE EGGRGRTPRQ PVDSPLYPLL 
EAAAEHYRQA LKSHPQRKYA VDYLKGRGLT GEIARDFGLG FAPPGWDNLL KQLGGDALQQ 
KAMIDAGLLI ENADNGRRYD RFRDRIMFPI RDSRGRVIAF GGRVLGDDKP KYLNSPETAV 
FHKGQELYGL YEARKHNRDL DEIMVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF 
RIVPSVLFCF DGDAAGRNAA WRALESTLPS LQDGRRARFL FLPEGEDPDT LVRAEGTDAF 
RARINQHAQP LADYFFQQLS EEADPRSLEG KAHLVTLAAP LIDKIPGNNL RALMRQRLSE 
ITGLSGEALS QVASAPRSHA PSTISQAPSS DYPDYGDIPD SAYYDAMPDL GGYEQPAPPQ 
QQAYERSNDG GKGNWKKEGG KWSKKGKGDF APRAPRTAVS VESPHLSALR TLLHHPQLAQ 
KVEDVSHFAD EEDTYAQLLV ALVGALQKNP GMRSLQLIAR WHGTEQGRLL RALAEKEWLI 
SADNLEQQFF DTITTLAARQ RERSLEQLLR KARLSELSAE EKDQLRALLS RNALPVSPSP 
TGA