| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4025 |
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| Symbol | |
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| ID | 5106322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4401293 |
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| End bp | 4402318 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505288 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001189504 |
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| Protein GI | 146309039 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.916408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTAC TGGGATTGGA AACTTCCTGC GATGAAACCG GCGTCGCGCT CTATGACAGC
GAGCGCGGCC TGCTGGCCGA CGCCCTGTTC AGCCAGATCG ACCTGCATCG CATCTATGGC
GGCGTGGTGC CGGAATTGGC CTCGCGCGAC CACGTCAAGC GCATGCTGCC GCTGATCCGC
CAGGTGCTCG ACGAGGCCGG GCGTGAGCCG AGCGATATCG ATGCGCTGGC CTATACCGCA
GGGCCCGGCC TGGTGGGAGC GCTGCTGGTC GGTGCCTCCT GCGCGCAGGC GCTGGCCTTC
GCCTGGGGTG TGCCGGCCGT TGGCGTGCAC CATATGGAAG GCCACCTGCT GGCGCCGATG
CTCGAGGAGC AGCCGCCGGC CTTTCCCTTC GTTGCCCTGC TGGTTTCCGG CGGTCACACC
CAGTTGGTGC GGGTCGACGG CATCGGCCAG TACCAGTTGC TCGGCGAGTC GCTGGACGAT
GCGGCCGGTG AGGCCTTCGA CAAGACCGCC AAGCTGATGG GGCTGAATTA TCCCGGTGGC
CCGGAGATCG CCAAACTGGC CGAGCAGGGC ACGCCGGGGC GCTTCGTCTT CCCGCGGCCG
ATGACCGACC GTCCGGGGCT GGATTTCAGC TTCAGCGGCC TCAAGACCTT CGCCCTGAAC
ACCTGGCAGC AGTGCCGCGA CAGCGGCGAC GACCTCGACC AAGCCCGCCG CGACATCGCG
CTGGCCTTCC AGCAGGCGGT GGTTGAGACT CTGACCATCA AGTGCAAGCG CGCGCTCAAG
CAGACCGGCC TGAACAGCCT GGTAATCGCC GGCGGGGTGA GTGCCAACAA GGCCCTGCGC
GAGCATCTGG AGCGCATGCT GGGTGAGCTG AAGGGCAAGG TGTTCTACGC GCGGCCGCGG
TTCTGCACCG ACAACGGCGC GATGATCGCC TACGCCGGTT GCCAGCGGTT GCTGGCCGGG
CAGCATGAGG ACCTGGCGAT CAAGGTGCAG GCGCGCTGGC CGATGGAGTC GCTGCCGGCG
CTGTAA
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| Protein sequence | MLVLGLETSC DETGVALYDS ERGLLADALF SQIDLHRIYG GVVPELASRD HVKRMLPLIR
QVLDEAGREP SDIDALAYTA GPGLVGALLV GASCAQALAF AWGVPAVGVH HMEGHLLAPM
LEEQPPAFPF VALLVSGGHT QLVRVDGIGQ YQLLGESLDD AAGEAFDKTA KLMGLNYPGG
PEIAKLAEQG TPGRFVFPRP MTDRPGLDFS FSGLKTFALN TWQQCRDSGD DLDQARRDIA
LAFQQAVVET LTIKCKRALK QTGLNSLVIA GGVSANKALR EHLERMLGEL KGKVFYARPR
FCTDNGAMIA YAGCQRLLAG QHEDLAIKVQ ARWPMESLPA L
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