Gene Pmen_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4023 
Symbol 
ID5106320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4400258 
End bp4400614 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID640505286 
Productdihydroneopterin aldolase 
Protein accessionYP_001189502 
Protein GI146309037 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAG TATTTATCGA GGGCCTGGAG GTCGACACGG TGATCGGCGC CTACGATTGG 
GAGCGCGAGA TTCGCCAGTG CCTGCGTCTC GACCTGCAGA TGGCCTGGGA TAACCGCCCT
GCTGCGGCCG GTGACGACCT CAACCTGGCG CTCGACTACG CCAGTGTGTC CGCACGCATC
CAGGCCTTCG CCGACGAATC GCAGTTCATT CTGGTGGAGA CCTTTGCCGA GCGTCTGGTG
CAGACCCTGA TGGACGAGTT CAACATTCCC TGGATGCGTC TGAAGCTGAC CAAGCCCGGC
GCAGTGCCGG CCGCGCGTGG CGGCGTAGGC GTGGAGATCG AGCGCGGATG CCTCTGA
 
Protein sequence
MDRVFIEGLE VDTVIGAYDW EREIRQCLRL DLQMAWDNRP AAAGDDLNLA LDYASVSARI 
QAFADESQFI LVETFAERLV QTLMDEFNIP WMRLKLTKPG AVPAARGGVG VEIERGCL