| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4021 |
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| Symbol | cca |
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| ID | 5106318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4398386 |
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| End bp | 4399618 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505284 |
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| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
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| Protein accession | YP_001189500 |
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| Protein GI | 146309035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.823718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTT ACAAAGTCGG CGGGGCAGTG CGCGATCGCC TGCTCGGCCG TCCCGTCAGC
GAAGTGGACT GGGTCGTGGT CGGTGCCAGC GCCGAGCAGA TGCTCGAGCT CGGCTACCGT
CCGGTGGGCG CCGACTTTCC GGTGTTCCTG CACCCGCAGA CGGGTGAGGA ATATGCCCTG
GCTCGCACCG AGCGCAAGAG CGGGCGCGGC TACGGCGGCT TCACCTTTCA CGCCAGCCCC
GAAGTCACGC TGGAAGAGGA CCTGATCCGC CGCGACCTGA GCGTCAACGC CATGGCCGAA
GACGAACAGG GCAAGCTGAT CGATCCCTAC GGCGGCCAGC AGGATCTAGC CGCGCGCATC
CTGCGCCACG TCTCCCCCGC CTTTGCCGAA GACCCGCTGC GCGTACTGCG CGTGGCCCGC
TTCGCCGCGC GCTATGCGCC GCTCGGTTTC CATGTGGCGG ATGAGACCCT GGGCCTGATG
CGCCAACTGG CCGAGTCCGG CGAACTGGCC CACCTTACGG CCGAGCGCAG TTGGAAGGAA
ATCTCCCGCG CGCTGATGGA ACCGCGCCCG GACGTCTTCA TCCAGGTGCT GCGCGACTGC
GGCGCGCTGG CCGCCCTGCT GCCGGAGGTG GACGATCTGT TCGGCGTACC GCAGCCGGAG
GCGCATCACC CGGAAATCGA CACCGGCGTG CATGTGCTGA GCGTGCTGCG TCAGTGCGCG
GAACACGACC AGCCGCTCAG CGTGCGCTGG GCCTGCCTGC TGCACGACGT CGGCAAGGGC
CTGACGCCGG AGGCCGAATG GCCGCGCCAT ATCGCTCATG AACACAAGGG GCTGCGCCTG
ATCCAGGCGA TCAACGAGCG CTGCAAGGCG CCGCGCGATT GCGCCGAGCT GGCAATGCTG
GTCGGCGAGT TTCACACCCA CGGCCATCGC GCGCTGGAGC TGCGCCCCTC GACGCTGCTG
GAACTGCTGC AGCGCTTCGA CGTATTCCGC CGCCCGCAAC GTTTCGCCGA ATTCGTCGCC
GCCTGCGAGA TGGATGCGCG TGGTCGACAC GGCCTGGAGC AGCGTCAGTA CCCGCAAGCC
GCGTACCTGC TCGGCGCCGC CGAAGCCGCG CGGCAAGTGC CGGTCAAGCC GTTGCTGGAG
AAGGGATTGA AGGGCGCGGA GTTGGGCGAA GCGCTCAACC GCGAGCGCCT GAGGGCACTC
AAGGCCTACA AAGCGCAACA TGCCCCCTCG TAG
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| Protein sequence | MQIYKVGGAV RDRLLGRPVS EVDWVVVGAS AEQMLELGYR PVGADFPVFL HPQTGEEYAL
ARTERKSGRG YGGFTFHASP EVTLEEDLIR RDLSVNAMAE DEQGKLIDPY GGQQDLAARI
LRHVSPAFAE DPLRVLRVAR FAARYAPLGF HVADETLGLM RQLAESGELA HLTAERSWKE
ISRALMEPRP DVFIQVLRDC GALAALLPEV DDLFGVPQPE AHHPEIDTGV HVLSVLRQCA
EHDQPLSVRW ACLLHDVGKG LTPEAEWPRH IAHEHKGLRL IQAINERCKA PRDCAELAML
VGEFHTHGHR ALELRPSTLL ELLQRFDVFR RPQRFAEFVA ACEMDARGRH GLEQRQYPQA
AYLLGAAEAA RQVPVKPLLE KGLKGAELGE ALNRERLRAL KAYKAQHAPS
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