Gene Pmen_4020 details

Gene Information

• Locus tag: Pmen_4020
• ID: 5106317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 4397712
• End bp: 4398272
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640505283
• Product: hypothetical protein
• Protein accession: YP_001189499
• Protein GI: 146309034

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.451299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 49
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAGGA GCCTCAGCAT CGCAGGCAGA CTCTGCGAGA CGTCCTGCAT GCGCGTATTT 
CTGGTACTGC TGTTGTGCCT GGGGCTGGCC ACCTGTGCCA GCCATATACC CCAGGCACAG 
ATCATCACCC CCGCCAACGA CGCGCTCGCC GGGCGTCACG GTTTCGAGCT GATCGATCCA 
CAATCTTCCC TGGAGGGTGA AGCCCCCTTT CCGGAGCGCT ATCGTCAGCT GCCGCAGTTG 
CTGCTGCATG GCCTTTCCGC CCGCGGCTAC CACGAAAGCC AGCAGCCGCA ACTGCGCGTC 
TATTACTGGC TGGCGGTTCG CGACGAACCG CTGACCTTCA AGGTCGATGT GCCGCCGCCC 
AACCCGCTTG GTCCCTACCA GGCCATCCAT CGCCTGCGTG ACGAGACCGG CACGCTGCGC 
TTGCGCCTCA CCGATCTGGA CGAGCGCATC CTCTGGGAAG GCGTCATCAG CACCGGCCTG 
AGCCCCGCGC GCGACAGCGC CGAGTTGCTG GAGCGCGCCA CCCGGGCGCT GACCGAGCAG 
ATTCCGCTGG CCACCCGGTA G 

 

Protein sequence

MARSLSIAGR LCETSCMRVF LVLLLCLGLA TCASHIPQAQ IITPANDALA GRHGFELIDP 
QSSLEGEAPF PERYRQLPQL LLHGLSARGY HESQQPQLRV YYWLAVRDEP LTFKVDVPPP 
NPLGPYQAIH RLRDETGTLR LRLTDLDERI LWEGVISTGL SPARDSAELL ERATRALTEQ 
IPLATR