Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4018 |
Symbol | |
ID | 5106315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4394851 |
End bp | 4396122 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640505281 |
Product | hypothetical protein |
Protein accession | YP_001189497 |
Protein GI | 146309032 |
COG category | [S] Function unknown |
COG ID | [COG2718] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG TGATCGACCG GCGCCTGAAT GGCAAGAACA AGAGCACGGT AAACCGCCAG CGCTTCCTGC GGCGCTACCG CGAACATATC AAGAAGGCGG TGGAGGAAGC CGTCAGCCGG CGCTCCATCA CCGACATGGA GCACGGCGAA CAGATCAGCA TTCCCGGCCG CGACATCGAC GAGCCGGTGC TGCACCACGG CCGCGGCGGC AAGCAGACCA TCGTCCATCC CGGCAACAAG GAGTTCACCG CCGGCGAACG CATCCCCAGG CCACAGGGTG GTGGCGGTGG GCGCGGCAGT GGCAAGGCGA GCAACTCCGG CGAGGGCATG GACGAGTTCG TCTTCCAGAT CACTCAGGAA GAATTCCTCG ACTTCATGTT CGAAGACCTG GAGCTGCCCA ACCTGGTCAA ACGCCACCTG ACCGGCGCAG ATACCTTCAA GACCGTGCGC GCGGGCATCA GCAACGAAGG CAATCCGTCA CGCATCAACA TCATCCGCAC GCTGCGCTCG GCCCATGCAC GGCGTATCGC CCTGTCCGGC TCCAGCCGCG CCAAACTGCG CGAGGCGAAG GCCGAACTGC TGCGCCTTAG AACGGAAGAA CCGGACAACT TCAGCGATAT TCAGGAAATC GAAGCGGAAA TCGAGCGTTT GAGCGCGCGC ATCCACCGCG TGCCCTTTCT CGATACCTTC GACCTCAAGT ACAACCTGCT GACCAAGCAG CCCAACCCCA GCTCCAAGGC GGTGATGTTC TGCCTGATGG ACGTGTCCGG CTCCATGACC CAGGCCACCA AGGACATCGC CAAGCGCTTC TTCATCCTGC TTTACCTGTT CCTCAAGCGG AACTACGACA AGATCGAGGT GGTGTTCATC CGCCACCACA CCAGTGCGAA AGAGGTGGAC GAAGAGGAGT TCTTCTACTC CCGCGAGACC GGCGGCACCA TCGTCTCCAG CGCCCTGAAG CTGATGCAGG AGATCATGGC CGAGCGTTAC CCGATCAACG AATGGAACAT CTATGCCGCC CAGGCGTCGG ACGGCGATAA CTGGAACGAT GACTCGCCGG TGTGTCGGGA TATATTGATC AACCAGATCA TGCCGTTCGT GCAGTACTTC ACCTACGTCG AGATCACCCC GCGCGAACAC CAGGCGCTGT GGTTCGAGTA CGAGCAGGTG GCCGAAGCCT TCGACGAAAG CTTTGCCCAG CAGCAACTGG TGTCCGCGGC GGACATCTAC CCGGTGTTCC GCGAACTGTT CCAGCGTCGC CTGGTGAGTT GA
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Protein sequence | MSYVIDRRLN GKNKSTVNRQ RFLRRYREHI KKAVEEAVSR RSITDMEHGE QISIPGRDID EPVLHHGRGG KQTIVHPGNK EFTAGERIPR PQGGGGGRGS GKASNSGEGM DEFVFQITQE EFLDFMFEDL ELPNLVKRHL TGADTFKTVR AGISNEGNPS RINIIRTLRS AHARRIALSG SSRAKLREAK AELLRLRTEE PDNFSDIQEI EAEIERLSAR IHRVPFLDTF DLKYNLLTKQ PNPSSKAVMF CLMDVSGSMT QATKDIAKRF FILLYLFLKR NYDKIEVVFI RHHTSAKEVD EEEFFYSRET GGTIVSSALK LMQEIMAERY PINEWNIYAA QASDGDNWND DSPVCRDILI NQIMPFVQYF TYVEITPREH QALWFEYEQV AEAFDESFAQ QQLVSAADIY PVFRELFQRR LVS
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