| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4008 |
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| Symbol | |
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| ID | 5110231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4382929 |
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| End bp | 4383600 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505271 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001189487 |
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| Protein GI | 146309022 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGA TGATCCTCGC CGCCGGCAAG GGTGAACGCC TGCGTCCGCT GACCCTGCAT
ACGCCGAAAC CGCTGGTGAA GGCGGCTGGC GTACCGTTGA TCGAGTATCA CGTCCGCGCC
CTGGTCGCCG CCGGCTTCAC CGAGCTGGTG ATCAACCATG CCTGGCTGGG CCAGCAGATC
GAGGGCTACC TCGGTGATGG CTCGCGCTTT GGCGCGCACA TCGTTTACTC ACCCGAGGGC
GAGCCTCTGG AAACCGGCGG TGGCATCTTC AAGGCGCTAC CGCTGTTGGC TGATGAGCCA
TTTCTGGTGG TCAACGGCGA CATCTTCACC GATTACCCGT TCGCCGAGCT GCGCAAGCCC
ATGAGCGGCC TGGCGCATCT GGTGCTGGTG GACAACCCGG CGCATCACCC GCAAGGGGAT
TTTGTTCTGG CGATGGGGCA GGTACAGGAC GCCGAGTCGC TGGGTGAGCG CCTGACTTAC
AGCGGTATCG CTGTATTGCA TCCGCGTCTG TTCGCCGCCT GCCAGCCAGG CGCTTTCAAG
CTGGCGCCGC TGCTGCGCTC GGCCATGCAA CAGGGGCAGG TCAGCGGTGA GCGCCATGCC
GGGTGCTGGA TCGACGTTGG CACCCACGAG CGCCTGGCCG AGGTGGAACG CCTGCTGCAG
GAGGCACGCT AG
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| Protein sequence | MKAMILAAGK GERLRPLTLH TPKPLVKAAG VPLIEYHVRA LVAAGFTELV INHAWLGQQI
EGYLGDGSRF GAHIVYSPEG EPLETGGGIF KALPLLADEP FLVVNGDIFT DYPFAELRKP
MSGLAHLVLV DNPAHHPQGD FVLAMGQVQD AESLGERLTY SGIAVLHPRL FAACQPGAFK
LAPLLRSAMQ QGQVSGERHA GCWIDVGTHE RLAEVERLLQ EAR
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