| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4005 |
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| Symbol | |
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| ID | 5110228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4378674 |
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| End bp | 4381079 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505268 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001189484 |
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| Protein GI | 146309019 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC TTCTTTCCTC TCTATCCCTG TTGCTGCTGT TGGTGATCTC CAACGCCTGG
GCTGAAAACC CGCGCATGCC GCTGCGCCCG GCTTTCGATG CCGAGCAGCG TGCCTGGCTC
AGGGATCATC CCGTGCTGCG CGTAGGCCTG GTCCAGCAGG CGCCCTGGGT TCAGCGCGGT
CAGAATAGGC AACTGACCGG GGCCAATGTC GAGCTGATGC AGCGTTTGCT GGAGGGCATG
GGCGTCGCCC CTGACTGGCG CCTGTATGCG GACCACGAGT CACTGGAGCG AGCGGCCAGC
GCGGGTGAGG TGGACCTGGC GCCGGGGCTG CAGCAGACGC CAGCCGGCCT GCGCATCTGG
CACTATTCCA TGCCCTACCT GCGCGTGCCG CATCTGGTGG TTGGCGAGCG CAGCGGAAGT
GGCGCGGTGG ATCTCGACCA GCTGCCGTTG GAGCAGATGG TCGCGCTACG CTCGCCGAGC
CAGGCTACCG AATATCTGGA GCGCACCCAT ACCAATCTGC GGTTGCGCGC GGCGTCCTCT
GAGCGTGCCG CTTTGCTGCT CTTGCTGGAT CAGGAGGTCA GCTATGCGGT GCTGGATGAA
GCGAGCCTTA GCCTGCTGCT GCGTGAATCA CGCTTCGCCA ATCTGAGTAT CGTCGGTGAC
ATTGGCCTGC CGCAGTTGCT GCGCCTGGCC ACGCGCCGCG ACCAGCCTCT GCTGTCCGCC
ATCGTCGACC AGACCCTGCA GGCTCTCCCC GCGCGCGAGC TTGAGGAGCT GCGCGAAACC
TGGATGCCGC TGCGTTACCC GCAGTCCAGC GATTTCGTCG GCTTCTGGAA GACCCTCACG
CTATTTCTCG CGCTGCTGCT GTTGATTGGC GCCACGGCGC TCTATCGCCA GCGCCAGCAG
ACGCGCTTGC TCGAACGGGG GCTGTTGGGT GCACGCGGCG AGCTGGATCG CCACCAGCAG
GCGGCCGAGG CGTTGCGCCT GAGCCAGTTC TCCATCGATC ACAGCACGGT GGGCATTCTC
TGGGTCAACT GGGACAGTCA CCTGCGCTAT GCCAACCGCG CTGCCGAACG CATGCTTGGC
TACGCCGCCG GTGAGCTGGT GGACAAGCCT CTGAGCCTGC TGGAACCGGG CCTCGACATG
GACCGCTGGC TTAACCTGTG GAAGCAGGTG CGTGAGCAGG GCGGTGGCTC GACAAGTTTC
GAAGTCGATT GCCTGCGCGC CGACGGTAGC CGCATGCCGG CCGACGTTTC GCTGAGCTTT
CTGCGCTACG GCCAGGCCGA ATATCTGGTG GTGTTTCTCA GCGACGTGAC CGAGCGCCGC
CGTGCGCGTG CGGCGCTGGA AGAGAGCGAG GCGCGCTTCA AGGGCATCGC CGGCAACGTG
CCCGGCCTGG TGTTTCGCCT GGAGCGCGCC GGGCCGGGGC AGACAGTCAA CTTCGCCTAT
ATCAGCGAGG CCAGTCAGGA GATGGTCGGC TGGCCGGCGC ATGAGCTGCA GCGTGAGGAT
CGCGGCATTC GCAGCCTGGT GCACCCGCAG GATCTCCCCA GCTACCTCAA CAGCCAGACG
CTGGCGCTGG AAGGCGAGAG CGACTGGTAC TGGCAGGGGC GCATCCTCAC CGCCGAGCAG
GAGGTGCTGT GGGCCGACAT TCGTACCACC GCGCGCCCGC TGGGCGGTGG TCGTGTGGTC
TGGGACGGCA TCCTCTGGGA CATCACCGAG AACAAGCTGG CCGAGCTGGC GCTGGCCGAC
TCGCGGGCGC GCCTGCGCGA ACTGTCCGCG CATCTGGAAA GCGTGCGTGA GGAGGAAAAG
GCGCGCATCG CCCGTGAGGT GCATGACGAG CTGGGCCAGG TGCTGACCGT GCTCAAGCTG
GAAACGGCGA TGTGCGAGCT GGCCTGCGCC GGTCAGGTGC CGGAGCTGGA CGAGCGCCTG
GCCAGCATGA AGCGTCTGAT CGCCCAGTTG TTCCAGCTGG TACGCGACGT GGCCACGGCG
CTGCGTCCAC CGATTCTTGA TGCAGGCATC GCCTCGGCCA TCGAATGGCA GGTACGCCGC
TTCGAGGAGC GTACGCAGAT CCCCTGCCTG GTGGAGGTGC CCGAGCACTT GCCGCGTTTG
CCCGATGCTC AGGCCATCGG CCTGTTCCGC ATCCTTCAGG AGGCGCTGAC CAATGTCATG
CGCCATGCCG GCGCGCACAG CGTGGTGGTA CGCCTGTGGC AGGAGGAGGG CGGGCTGTGC
CTGTCGGTGA GCGACGATGG CAAGGGTTTC GATGCCGCCA TGCGCAAGCC CGGGCAGTCC
TTCGGTCTGG TCGGCATGCA GGAGCGCATG CTCATGCTCG GCGGCCAGTT GCAGATTGAC
AGCCGGCCGG GTGAGGGCAC TACGCTGTAC GCGCGCATAA CCCTGGATGA GGAGGTCGCG
GCGTGA
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| Protein sequence | MKSLLSSLSL LLLLVISNAW AENPRMPLRP AFDAEQRAWL RDHPVLRVGL VQQAPWVQRG
QNRQLTGANV ELMQRLLEGM GVAPDWRLYA DHESLERAAS AGEVDLAPGL QQTPAGLRIW
HYSMPYLRVP HLVVGERSGS GAVDLDQLPL EQMVALRSPS QATEYLERTH TNLRLRAASS
ERAALLLLLD QEVSYAVLDE ASLSLLLRES RFANLSIVGD IGLPQLLRLA TRRDQPLLSA
IVDQTLQALP ARELEELRET WMPLRYPQSS DFVGFWKTLT LFLALLLLIG ATALYRQRQQ
TRLLERGLLG ARGELDRHQQ AAEALRLSQF SIDHSTVGIL WVNWDSHLRY ANRAAERMLG
YAAGELVDKP LSLLEPGLDM DRWLNLWKQV REQGGGSTSF EVDCLRADGS RMPADVSLSF
LRYGQAEYLV VFLSDVTERR RARAALEESE ARFKGIAGNV PGLVFRLERA GPGQTVNFAY
ISEASQEMVG WPAHELQRED RGIRSLVHPQ DLPSYLNSQT LALEGESDWY WQGRILTAEQ
EVLWADIRTT ARPLGGGRVV WDGILWDITE NKLAELALAD SRARLRELSA HLESVREEEK
ARIAREVHDE LGQVLTVLKL ETAMCELACA GQVPELDERL ASMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQVRR FEERTQIPCL VEVPEHLPRL PDAQAIGLFR ILQEALTNVM
RHAGAHSVVV RLWQEEGGLC LSVSDDGKGF DAAMRKPGQS FGLVGMQERM LMLGGQLQID
SRPGEGTTLY ARITLDEEVA A
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