| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4002 |
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| Symbol | |
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| ID | 5110225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4375564 |
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| End bp | 4376595 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505265 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001189481 |
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| Protein GI | 146309016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT CCCTGAAGCT GGCGGCATTG GCCCTGGGCG TTAGCTGCGC CATGCCGGCA
CTGGCGGTGG ACCTGACAGC GGTATCCTTC GGCGGCGCGA ACAAGGCGGC GCAGGTCAAG
GCGTTCTACG AACCCTTCGA GAAGGAAACC GGCAACAAGG TGCTGGGCGG CGAATACAAC
GGTGAAATGG CCAAGGTCAA AGCCATGGTC GATACCCGCA GCGTGAGCTG GGATCTGGTC
GAGGTGGAGT CGCCGGAACT GGCCCGCGGT TGCGATGAAG GCCTTTTCGA GGAACTCGAC
CCGGCGCTGT TCGGCGATGA GTCCGACTTC ATTGATGGCG CCATCCAGCC GTGCGGCGTC
GGCTTCTTCG TCTGGTCCAC GGTGCTGGCC TACAACGCCG ACAAACTCAG CGCGGCGCCG
ACCAACTGGG CCGACTTCTG GGATGTGGCG AAATTCCCGG GCAAGCGCGG TCTGCGCAAG
GGCGCCAAGT ACACCCTGGA ATTCGCCCTG ATGGCCGACG GCGTGCCGGT CAAGGACGTG
TACAAGGTGC TGGCTACCAA GGAAGGCCAG GATCGCGCGT TCAAGAAACT CGATGAGCTC
AAGCCGAACA TCCAGTGGTG GGAAGCCGGC GCCCAGCCGC CGCAGTACCT CGCCTCCGGC
GACGTGGTGA TGAGCTCGGC CTACAACGGC CGTATCGCGG CGGTGCAGGG CGAGAGCAAC
CTGCAGGTGG TGTGGAACGG CGGCATCTAC GACTTCGACT CCTGGGCCAT CCCGCGTGGC
GCGAAGAACG TCGAGCTGGC CAAGCAGTTC ATCGCCTTCT CGGTCAAACC CGAAGCGCAG
AAGACCTATT CGGAGAACAT CGCCTACGGG CCGGCCAACA AGCAGGCCAT CGAGCTGCTC
GCGCCGGAGC GTCTGAACCT GATGCCGACC ACGCCGGAAA ATATTGCCAA TCAGGTGGCC
ATCGACGTGA CCTTCTGGGC TGACTACGGC GAGCAGTTGG AACAGCGCTT CAACGCCTGG
GCCGCGCGCT AA
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| Protein sequence | MTKSLKLAAL ALGVSCAMPA LAVDLTAVSF GGANKAAQVK AFYEPFEKET GNKVLGGEYN
GEMAKVKAMV DTRSVSWDLV EVESPELARG CDEGLFEELD PALFGDESDF IDGAIQPCGV
GFFVWSTVLA YNADKLSAAP TNWADFWDVA KFPGKRGLRK GAKYTLEFAL MADGVPVKDV
YKVLATKEGQ DRAFKKLDEL KPNIQWWEAG AQPPQYLASG DVVMSSAYNG RIAAVQGESN
LQVVWNGGIY DFDSWAIPRG AKNVELAKQF IAFSVKPEAQ KTYSENIAYG PANKQAIELL
APERLNLMPT TPENIANQVA IDVTFWADYG EQLEQRFNAW AAR
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