| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3994 |
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| Symbol | |
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| ID | 5110217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4367884 |
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| End bp | 4368120 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505257 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001189473 |
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| Protein GI | 146309008 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.168145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.273173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGC CAACCGAGAC GGCGGCCAAC AGCGAGCCAA TGGAGAAGCC GGTCGACGTG
CTGCTGCAGC TACCCGAGGT CTGCCGCCAG GCAGGCTTCG GGAAGACGGC CATCTACCGG
ATGATGAAGG AAGGCACCTT CCCCGAACCG ATCAAGATCG GTCCAGCGTC GCGCTGGTCG
CAGATCGAGG TGCAGGCGTG GATTGAAAAG CAAAAGGCCG CCCGTAGGGC GGCCTGA
|
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| Protein sequence | MNKPTETAAN SEPMEKPVDV LLQLPEVCRQ AGFGKTAIYR MMKEGTFPEP IKIGPASRWS
QIEVQAWIEK QKAARRAA
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