| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3981 |
|---|
| Symbol | |
|---|
| ID | 5110204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4360069 |
|---|
| End bp | 4360581 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640505244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001189460 |
|---|
| Protein GI | 146308995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000690616 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.122233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACC GTTCACGCTG GAGCAGTGTC GAGCGCGCGA AGCGTTCGAT CCTGACTCTG
CCTCAAGCGC TGCACCACGC GGCGCACGAC TATCCGGGCG GCGCCACCGC TATCGCCGCC
GTCGAGGGGC ATAACCCTAC GACCTTCAAT CACAAGCTTT CGCTGACCAA TACCACGCAC
ACGCCGAACA TCCACGACAT GGCCCTGGTG CTGGACCTGA CCCGCGATCC GCGCATTGTT
GATTCGATCC TGCACCCGAT TGGCTGGGTG GGCATCGATA TCAGTGACCT GCGCGAAACG
GATACGCCGC AGGCTCTGCT GGGCAGCATC GGTGAGCTGC TGAACCGGGA GGGCGACGTG
GTGCGTCACC TCACCAAGTC TCTCGATGAT GGACACCTTG ATTGCGACGA GCTGGCCGAG
TACGAGCTCC TGGCCGAGCG CCTGGCGCAA GCACTGTTCA AGCTGGGTGC CGTGGTGCGC
CGCAAGCATG AGGAGGGGCG CGCCGATGGC TGA
|
|---|
| Protein sequence | MPYRSRWSSV ERAKRSILTL PQALHHAAHD YPGGATAIAA VEGHNPTTFN HKLSLTNTTH
TPNIHDMALV LDLTRDPRIV DSILHPIGWV GIDISDLRET DTPQALLGSI GELLNREGDV
VRHLTKSLDD GHLDCDELAE YELLAERLAQ ALFKLGAVVR RKHEEGRADG
|
|---|
| |