| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3973 |
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| Symbol | |
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| ID | 5110196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4353210 |
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| End bp | 4354916 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505236 |
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| Product | phage terminase |
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| Protein accession | YP_001189452 |
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| Protein GI | 146308987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.230918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAGA CGACTGAGCG GCTCTTCGAC TGGGACCTGT ACGGCCGCCA GGTGCTGGCG
GGCGAAATCC CCGTCTGCAA GTGGACGCGC CTGGCGGTTG AGCGCCATTA CCGCGACCTG
CAAAACGGCC ATGAGCGTGG CCTGTGGTTC AGCGAGGATC ACGCCCAGCA CGCGCTGGAG
TTCTTCCTGT ACCTGCGGCA CTCGAAAGGC GAGTGGGCCG GGCAACAGTT CGTGCCGTCG
CTTTGGCAGC AGTTCTGGAT CGCCCTGGCG TTTGGCTGGA TGCGCGCCGA TGGCACCCGC
CGCTTTCGCA AGGTTTGGGA GGAGGTGCCG CGCAAGAACG GCAAGAGCAC CAAGCTCTCC
GGCGTCGGTC TCTACCTGTT TCGCGGTGAT TGCGAAGGCG GCCCTGAGGT CTACACCGCC
GCCACCAAGC TGGACCAGGC GAAGATCACG CACGATGAAG CCGTGCGCAT GGTGCAGAGC
AGCCCACGAT TGAGGCGCAG CATCAGCGAG CGCCGAGGCG AGCTGTTCGT GCGCGGCAAG
GCTGACGTGT TCAAGCCGCT GGGGCGTGAC AGTAAATCGT TGGACGGCCT CAACCCGCAC
GGCGCCATCT TCGACGAAGT GCATGCCATG CCGGATGCCG GAATCATCGA CGTGATCCGC
TCCGGTACGG GCGCCCGTCG CAACTGGCTG ATGTGGATGA TTACCACCGC CGGCATCAAC
TTGCGCGGCC CTGGCTTCGA GCAGCACGGC TATGCCGAGA AGGTGCTGGA AGGTGTGTTC
GAGGATGATG AATTCCTCGC GATCATCTAC AGCGTCGATG ATCCGGAGAA GTGGCAAGAC
CCTATCGAGT GGCAGAAGGC CAATCCGAAT TTTGGCGTTT CCGTCTACGA AGACGGGCTG
CGCGAGGCCT GTAACAGTGC CATCCGGCTG CCTTCCGAGC AGCCCGAGTT CAAGACCAAG
CGCCTGAACA TCTGGCTATC CGGCGGCGCC AAGTGGATCG CCTTGGCCGA CTGGCGCGCC
TGCGAGGACA AGAGCCTGAA GCTCGATGAC TTCGCAGGCA AGCGCTGCTG GATCGGCCTC
GACCTGGCCG AGCGGCGCGA CATCGCTGCG GTGTGCTACG TGTTCCGCGA GAACGGCAAG
TACTACGTGT TCTGGCGTTT CTACCAGAAC GAGTACCAGG CCAGCCTGCT GGAGAACAAG
CACTACCAGA CCTGGGCCAA TGCGGGCTTC CTGCACATCA CGCCAGGCAA CGCGACGGAC
TTCGACGTGA TCGGCGACCA GATTGCCGGC CGCCGAGCCG AGCACAGCAT CGAGGTGATC
GAGAAGCCCG GCGACCTGCA GCAGTTCGCC GTGGAGGAGC TCGATTACGA CCCCAAGTTC
GCCCCGTACT TCGTCAAGAA GCTGATGGAG AAGGGCGTGC CGGCCGTTGA AATCGGGCAG
AACCCCAGCA CCTTCACCGC CCCGATCATC GAGGTGGAGA ACCTCGTGCT GACCGGCAAG
CTAGTGCACG AGGAAAGCCC GGTGATGGAT TGGATGATCT CCAACGCCAA GAAGCTCACC
AGCAAATACA ACGGCCTGAG CCAGATCGGC AAAGACCGCG AAAGCGAAAA AATCGACGGC
GTGCTGGCGA TGCTCATGGC GATTGCCCGG GCGACGGCTG CCGAGTTTGA AGAGCCGCCG
GCCGAGGCCG GCATCATCCT GCTGTAG
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| Protein sequence | MVETTERLFD WDLYGRQVLA GEIPVCKWTR LAVERHYRDL QNGHERGLWF SEDHAQHALE
FFLYLRHSKG EWAGQQFVPS LWQQFWIALA FGWMRADGTR RFRKVWEEVP RKNGKSTKLS
GVGLYLFRGD CEGGPEVYTA ATKLDQAKIT HDEAVRMVQS SPRLRRSISE RRGELFVRGK
ADVFKPLGRD SKSLDGLNPH GAIFDEVHAM PDAGIIDVIR SGTGARRNWL MWMITTAGIN
LRGPGFEQHG YAEKVLEGVF EDDEFLAIIY SVDDPEKWQD PIEWQKANPN FGVSVYEDGL
REACNSAIRL PSEQPEFKTK RLNIWLSGGA KWIALADWRA CEDKSLKLDD FAGKRCWIGL
DLAERRDIAA VCYVFRENGK YYVFWRFYQN EYQASLLENK HYQTWANAGF LHITPGNATD
FDVIGDQIAG RRAEHSIEVI EKPGDLQQFA VEELDYDPKF APYFVKKLME KGVPAVEIGQ
NPSTFTAPII EVENLVLTGK LVHEESPVMD WMISNAKKLT SKYNGLSQIG KDRESEKIDG
VLAMLMAIAR ATAAEFEEPP AEAGIILL
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