| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3972 |
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| Symbol | |
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| ID | 5110195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4351907 |
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| End bp | 4353142 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640505235 |
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| Product | HK97 family phage portal protein |
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| Protein accession | YP_001189451 |
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| Protein GI | 146308986 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.25148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAGC TGGAGCAGCA GCTGGCTGCC GTCAACAATC AGGATCGGGC GCCGGTATCT
ACCAGTAACC GCGAGGGCAT TCTCGACCTG TTCAACGTCA GCCCGAGTCA TGCCGGGCCT
GTGGTCAACG CCACCACCGC CATGCGCAGC TCGGCTGTCT ATGCCAGTGT GGCGCTCATT
GCCGGCGCGA TTGCGAGCAT GCCAAAGCCC ATCTTCCGGC GCACGGACGG GGGGCGGGAG
CAGACCGAAC ATCCGTACTG GTGGCTGCTC AATGAACAGG CTACGCCTTG TTTTTCGGCC
TACGCCTTCT GGGAATACTT GGTCAGCTGC AAGCTGCTGC GCGGCGATTC TTATGGCTAC
ATCGTGCGTA ACGGCGCCGG AATACCCATC GAGCTGGTGC CCGTGCCCTG GGCCAATGTG
ATTGCCGAGA AGCGTGCGCG GCGGCTGGTG TACTTCATCG AGCTGGATGG TGAATACATC
GGCGTTGATC AGGACGACAT GCTGCATTTC CCCAGCCTCG GGTTTGATGG CGTCAAGAGT
CCCTCCGTGA TCAAGCTGGC CGCCAAGCAG GCTGTGGGGG TTTCGTTGGC TGCTGAAGAG
TACGCCGGCC GCTTCTTCAG CAACGGCGCG CGACCTGACT TCGCCCTGAA GCACCCAGGA
AATCCGACCA GGGAGCAGGT CAACCTGCTG CGCGAAATGT GGGCAGAGCG CCACCAGGGC
GTTGGGCAAA GTCACCTGCC AGCGGTGCTG ACCGGCGGCA TGGATGTGGC TGAGCTCACG
ATGTCCGCCG AGGACTCCCA GCTGTTGGAG ACGCGGAAGT GGCAGGTGAT CGACATTGCT
CGCGCCTTTG GCGTGCCGCC GCACATGATC GGTGAGACGG AGAAGACCAG CGCCTGGGGT
ACTGGCATCG AGCAGATGTC CATCGGCTTC GTCCGCTTCA CACTGAACCG CCACCTGAGG
CCTATCGAGC AGGAGCTCAA CCGCAAGCTT TGGCCAAACA GCCCGCGCTA CTTCGTGGAG
TTCAACCGCG AAGGCCTGCT GGCCGGCGAT AGCAAGGCCG AGGCTGAATA CTTCACCAAG
GCCCTGGGCG GCCCCGGTAA TCGGGGTTAC ATGACGGTGA ACGAAGTTCG CCGCATCAAG
AATCTGCCGC CTATCGAAGG TGGTGATGTC CTCTACACAC CGGAGAGCAC CAGCAATGCG
CAACCGCCTG CTGAACCTGA TCAAGGACAA CCTTAA
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| Protein sequence | MHELEQQLAA VNNQDRAPVS TSNREGILDL FNVSPSHAGP VVNATTAMRS SAVYASVALI
AGAIASMPKP IFRRTDGGRE QTEHPYWWLL NEQATPCFSA YAFWEYLVSC KLLRGDSYGY
IVRNGAGIPI ELVPVPWANV IAEKRARRLV YFIELDGEYI GVDQDDMLHF PSLGFDGVKS
PSVIKLAAKQ AVGVSLAAEE YAGRFFSNGA RPDFALKHPG NPTREQVNLL REMWAERHQG
VGQSHLPAVL TGGMDVAELT MSAEDSQLLE TRKWQVIDIA RAFGVPPHMI GETEKTSAWG
TGIEQMSIGF VRFTLNRHLR PIEQELNRKL WPNSPRYFVE FNREGLLAGD SKAEAEYFTK
ALGGPGNRGY MTVNEVRRIK NLPPIEGGDV LYTPESTSNA QPPAEPDQGQ P
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